Evidence map›Paper›PMID 10444063›Full record

ArticleThe Journal of cell biology1999

Association of chromosome territories with the nuclear matrix. Disruption of human chromosome territories correlates with the release of a subset of nuclear matrix proteins.

H Ma, A J Siegel, R Berezney

Abstract read
In one paragraph

Article in The Journal of cell biology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed.

  1. Nuclear architecture and the structural basis of mitotic memory.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2023
    Review
  2. Nucleus (Austin, Tex.) · 2022
    Article
  3. STAR protocols · 2022
    Article
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  5. Article
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  7. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

H MaDepartment of Biological Sciences, State University of New York at Buffalo, Buffalo, New York 14260, USA.
A J Siegel
R Berezney

Funding

NUCLEAR MATRIX STRUCTURES AND GENOMIC FUNCTIONR01GM023922 · NIGMS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI BEREZNEY, RONALD · 1985 to 2002
$1.1M
NIGMS NIH HHS GM 23922
6 · The paper itself

Abstract

To study the possible role of the nuclear matrix in chromosome territory organization, normal human fibroblast cells are treated in situ via classic isolation procedures for nuclear matrix in the absence of nuclease (e.g., DNase I) digestion, followed by chromosome painting. We report for the first time that chromosome territories are maintained intact on the nuclear matrix. In contrast, complete extraction of the internal nuclear matrix components with RNase treatment followed by 2 M NaCl results in the disruption of higher order chromosome territory architecture. Correlative with territorial disruption is the formation of a faint DNA halo surrounding the nuclear lamina and a dispersive effect on the characteristically discrete DNA replication sites in the nuclear interior. Identical results were obtained using eight different human chromosome paints. Based on these findings, we developed a fractionation strategy to release the bulk of nuclear matrix proteins under conditions where the chromosome territories are maintained intact. A second treatment results in disruption of the chromosome territories in conjunction with the release of a small subset of acidic proteins. These proteins are distinct from the major nuclear matrix proteins and may be involved in mediating chromosome territory organization.

Indexed as

Ammonium SulfateCell LineCell NucleusChromosome PaintingChromosomes, HumanDisulfidesDNADNA ReplicationElectrophoresis, Gel, Two-DimensionalFibroblastsHumansMicroscopy, ElectronMicroscopy, FluorescenceMolecular WeightNuclear MatrixNuclear ProteinsAmmonium SulfateDisulfidesDNANuclear ProteinsRibonuclease, PancreaticSodium Chloride

Identifiers

PMID10444063
PMCPMC2150557

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LicenceCC BY-NC-SA
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.