Evidence map›Paper›PMID 10441570›Full record

ArticleAmerican journal of human genetics1999

The phenotypic spectrum of GLI3 morphopathies includes autosomal dominant preaxial polydactyly type-IV and postaxial polydactyly type-A/B; No phenotype prediction from the position of GLI3 mutations.

U Radhakrishna, D Bornholdt, H S Scott, U C Patel, C Rossier, H Engel, A Bottani, D Chandal, J L Blouin, J V Solanki and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 185 citations in OpenAlex.

  1. FAM92A Underlies Nonsyndromic Postaxial Polydactyly in Humans and an Abnormal Limb and Digit Skeletal Phenotype in Mice.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2019
    Trial
  2. Article
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  4. A novelHeliyon · 2024
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  12. The Story of the Hand.Indian journal of plastic surgery : official publication of the Association of Plastic Surgeons of India · 2021
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  14. Review
  15. Article
  16. A Novel NonsenseFrontiers in genetics · 2020
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 3 countries.

U RadhakrishnaDivision of Medical Genetics, University of Geneva Medical School, Geneva, Switzerland.
D Bornholdt
H S Scott
U C Patel
C Rossier
H Engel
A Bottani
D Chandal
J L Blouin
J V Solanki
K H Grzeschik
S E Antonarakis
Philipps University of Marburg · DEUniversity of Geneva · CHAnand Agricultural University · INGujarat University · INUniversity Hospital of Geneva · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Functional characterization of a gene often requires the discovery of the full spectrum of its associated phenotypes. Mutations in the human GLI3 gene have been identified in Greig cepalopolysyndactyly, Pallister-Hall syndrome (PHS), and postaxial polydactyly type-A (PAP-A). We studied the involvement of GLI3 in additional phenotypes of digital abnormalities in one family (UR003) with preaxial polydactyly type-IV (PPD-IV), three families (UR014, UR015, and UR016) with dominant PAP-A/B (with PPD-A and -B in the same family), and one family with PHS. Linkage analysis showed no recombination with GLI3-linked polymorphisms. Family UR003 had a 1-nt frameshift insertion, resulting in a truncated protein of 1,245 amino acids. A frameshift mutation due to a 1-nt deletion was found in family UR014, resulting in a truncated protein of 1,280 amino acids. Family UR015 had a nonsense mutation, R643X, and family UR016 had a missense mutation, G727R, in a highly conserved amino acid of domain 3. The patient with PHS had a nonsense mutation, E1147X. These results add two phenotypes to the phenotypic spectrum caused by GLI3 mutations: the combined PAP-A/B and PPD-IV. These mutations do not support the suggested association between the mutations in GLI3 and the resulting phenotypes. We propose that all phenotypes associated with GLI3 mutations be called "GLI3 morphopathies," since the phenotypic borders of the resulting syndromes are not well defined and there is no apparent genotype-phenotype correlation.

Indexed as

MutationNerve Tissue ProteinsRepressor ProteinsXenopus ProteinsAmino Acid SequenceBase SequenceChromosomes, Human, Pair 7CodonDNA-Binding ProteinsDNA Mutational AnalysisExonsFamily HealthFemaleGenes, DominantGenetic LinkageGenotypeCodonDNA-Binding ProteinsGLI3 protein, humanGli3 protein, mouseGLI3 protein, XenopusKruppel-Like Transcription FactorsNerve Tissue ProteinsRepressor ProteinsTranscription FactorsXenopus ProteinsZinc Finger Protein Gli3

Identifiers

PMID10441570
PMCPMC1377970
OpenAlexW2052137652

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.