Evidence map›Paper›PMID 10439508›Full record

ArticleJournal of the American Society for Mass Spectrometry1999

Fourier transform ion cyclotron resonance mass spectrometric detection of small Ca(2+)-induced conformational changes in the regulatory domain of human cardiac troponin C.

F Wang, W Li, M R Emmett, A G Marshall, D Corson, B D Sykes

Abstract read
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In one paragraph

Article in Journal of the American Society for Mass Spectrometry, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.5field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 27 citations in OpenAlex.

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  7. Immucillin-H binding to purine nucleoside phosphorylase reduces dynamic solvent exchange.Protein science : a publication of the Protein Society · 2000
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

F WangCenter for Interdisciplinary Magnetic Resonance, Florida State University, Tallahassee 32310, USA.
W Li
M R Emmett
A G Marshall
D Corson
B D Sykes
National High Magnetic Field Laboratory · USUniversity of Alberta · CAFlorida State University · US

Funding

STOCHASTIC FT ION CYCLOTRON RESONANCE MASS SPECTROMETRYR01GM031683 · NIGMS · OHIO STATE UNIVERSITY · PI MARSHALL, ALAN G · 1985 to 2000
$190k
NIGMS NIH HHS GMJ31683
6 · The paper itself

Abstract

Troponin C (TnC), a calcium-binding protein of the thin filament of muscle, plays a regulatory role in skeletal and cardiac muscle contraction. NMR reveals a small conformational change in the cardiac regulatory N-terminal domain of TnC (cNTnC) on binding of Ca2+ such that the total exposed hydrophobic surface area increases very slightly from 3090 +/- 86 A2 for apo-cNTnC to 3108 +/- 71 A2 for Ca(2+)-cNTnC. Here, we show that measurement of solvent accessibility for backbone amide protons by means of solution-phase hydrogen/deuterium (H/D) exchange followed by pepsin digestion, high-performance liquid chromatography, and electrospray ionization high-field (9.4 T) Fourier transform Ion cyclotron resonance mass spectrometry is sufficiently sensitive to detect such small ligand binding-induced conformational changes of that protein. The extent of deuterium incorporation increases significantly on binding of Ca2+ for each of four proteolytic segments derived from pepsin digestion of the apo- and Ca(2+)-saturated forms of cNTnC. The present results demonstrate that H/D exchange monitored by mass spectrometry can be sufficiently sensitive to detect and identify even very small conformational changes in proteins, and should therefore be especially informative for proteins too large (or too insoluble or otherwise intractable) for NMR analysis.

Indexed as

Amino Acid SequenceCalciumCatalytic DomainCyclotronsFourier AnalysisHumansHydrogenMass SpectrometryMolecular Sequence DataMyocardiumPepsin APeptide MappingProtein ConformationSolventsTroponin CCalciumHydrogenPepsin ASolventsTroponin C

Identifiers

PMID10439508
OpenAlexW1995862678

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.