Evidence map›Paper›PMID 10438770›Full record

ArticleJournal of bacteriology1999

Transcriptional analysis of the hmw gene cluster of Mycoplasma pneumoniae.

R H Waldo, P L Popham, C E Romero-Arroyo, E A Mothershed, K K Lee, D C Krause

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.0field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
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  5. Mycoplasma hyopneumoniae transcription unit organization: genome survey and prediction.DNA research : an international journal for rapid publication of reports on genes and genomes · 2011
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  16. Transcription in Mycoplasma pneumoniae.Nucleic acids research · 2000
    Article
  17. Article
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

R H WaldoDepartment of Microbiology, University of Georgia, Athens, Georgia 30602, USA.
P L Popham
C E Romero-Arroyo
E A Mothershed
K K Lee
D C Krause
University of Georgia · US

Funding

GENETIC ANALYSIS OF MYCOPLASMA PNEUMONIAE CELL ADHERENCER01AI023362 · NIAID · UNIVERSITY OF GEORGIA (UGA) · PI KRAUSE, DUNCAN C · 1986 to 2008
$2.4M
NIAID NIH HHS AI23362NIAID NIH HHS R01 AI023362
6 · The paper itself

Abstract

Mycoplasma pneumoniae adherence to host cells is a multifactorial process that requires the cytadhesin P1 and additional accessory proteins. The hmw gene cluster consists of the genes p30, hmw3, and hmw1, the products of which are known to be essential for cytadherence, the rpsD gene, and six open reading frames of unknown function. Putative transcriptional terminators flank this locus, raising the possibility that these genes are expressed as a single transcriptional unit. However, S1 nuclease protection and primer extension experiments identified probable transcriptional start sites upstream of the p32, p21, p50, and rpsD genes. Each was preceded at the appropriate spacing by the -10-like sequence TTAAAATT, but the -35 regions were not conserved. Analysis of the M. pneumoniae genome sequence indicated that this promoter-like sequence is found upstream of only a limited number of open reading frames, including the genes for P65 and P200, which are structurally related to HMW1 and HMW3. Promoter deletion studies demonstrated that the promoter-like region upstream of p21 was necessary for the expression of p30 and an hmw3-cat fusion in M. pneumoniae, while deletion of the promoter-like region upstream of p32 had no apparent effect. Analysis by reverse transcription-PCR confirmed transcriptional linkage of all the open reading frames in the hmw gene cluster. Taken together, these findings suggest that the genes of this locus constitute an operon expressed from overlapping transcripts.

Indexed as

Cell Adhesion MoleculesGene Expression Regulation, BacterialAdhesins, BacterialBacterial ProteinsBase SequenceBlotting, NorthernCell DivisionChloramphenicolChromosome MappingGene DeletionMembrane ProteinsMycoplasma pneumoniaePromoter Regions, GeneticProtein Synthesis InhibitorsReverse Transcriptase Polymerase Chain ReactionRNA, BacterialAdhesins, BacterialBacterial ProteinsCell Adhesion MoleculesChloramphenicolHMW1 protein, MycoplasmaHMW2 protein, bacteriaHMW3 protein, MycoplasmaMembrane ProteinsProtein Synthesis InhibitorsRNA, BacterialRNA, Messenger

Identifiers

PMID10438770
PMCPMC93987
OpenAlexW1535754028

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.