Evidence map›Paper›PMID 10438755›Full record

ArticleJournal of bacteriology1999

RpoS synthesis is growth rate regulated in Salmonella typhimurium, but its turnover is not dependent on acetyl phosphate synthesis or PTS function.

C Cunning, T Elliott

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 37 citations in OpenAlex.

  1. Review
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  12. The acetate switch.Microbiology and molecular biology reviews : MMBR · 2005
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

C CunningDepartment of Microbiology and Immunology, West Virginia University Health Sciences Center, Morgantown, West Virginia 26506, USA.
T Elliott
West Virginia University · US

Funding

GENETIC CONTROL OF HEME SYNTHESIS IN S. TYPHIMURIUMR01GM040403 · NIGMS · WEST VIRGINIA UNIVERSITY · PI ELLIOTT, THOMAS A · 1988 to 2001
$442k
NIGMS NIH HHS GM40403
6 · The paper itself

Abstract

The RpoS sigma factor of enteric bacteria is either required for or augments the expression of a number of genes that are induced during nutrient limitation, growth into stationary phase, or in response to stresses, including high osmolarity. RpoS is regulated at multiple levels, including posttranscriptional control of its synthesis, protein turnover, and mechanisms that affect its activity directly. Here, the control of RpoS stability was investigated in Salmonella typhimurium by the isolation of a number of mutants specifically defective in RpoS turnover. These included 20 mutants defective in mviA, the ortholog of Escherichia coli rssB/sprE, and 13 mutants defective in either clpP or clpX which encode the protease active on RpoS. An hns mutant was also defective in RpoS turnover, thus confirming that S. typhimurium and E. coli have identical genetic requirements for this process. Some current models predict the existence of a kinase to phosphorylate the response regulator MviA, but no mutants affecting a kinase were recovered. An mviA mutant carrying the D58N substitution altering the predicted phosphorylation site is substantially defective, suggesting that phosphorylation of MviA on D58 is important for its function. No evidence was obtained to support models in which acetyl phosphate or the PTS system contributes to MviA phosphorylation. However, we did find a significant (fivefold) elevation of RpoS during exponential growth on acetate as the carbon and energy source. This behavior is due to growth rate-dependent regulation which increases RpoS synthesis at slower growth rates. Growth rate regulation operates at the level of RpoS synthesis and is mainly posttranscriptional but, surprisingly, is independent of hfq function.

Indexed as

DNA-Binding ProteinsEscherichia coli ProteinsSalmonella typhimuriumAcetic AcidBacterial ProteinsCarrier ProteinsCatalaseCell DivisionCloning, MolecularCulture MediaDNA PrimersGene Expression Regulation, BacterialGene Expression Regulation, EnzymologicGenes, ReporterGlucoseHost Factor 1 ProteinAcetic Acidacetyl phosphateBacterial ProteinsCarrier ProteinsCatalaseCulture MediaDNA-Binding ProteinsDNA PrimersEscherichia coli ProteinsGlucoseHost Factor 1 Proteinhydroperoxidase IIintegration host factor, E coliIntegration Host FactorsLrhA protein, bacteriaLrhA protein, E colimethylglucosideMethylglucosidesOrganophosphatesrssB protein, E coliSigma Factorsigma factor KatF protein, BacteriaTranscription Factors

Identifiers

PMID10438755
PMCPMC93972
OpenAlexW2116511990

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.