Evidence map›Paper›PMID 10438742›Full record

ArticleJournal of bacteriology1999

The icfG gene cluster of Synechocystis sp. strain PCC 6803 encodes an Rsb/Spo-like protein kinase, protein phosphatase, and two phosphoproteins.

L Shi, K M Bischoff, P J Kennelly

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. The RRM domain-containing protein Rbp3 interacts with ribosomes and the 3' ends of mRNAs encoding photosynthesis proteins.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  17. A PP2C-type phosphatase dephosphorylates the PII signaling protein in the cyanobacterium Synechocystis PCC 6803.Proceedings of the National Academy of Sciences of the United States of America · 2001
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

L ShiDepartment of Biochemistry and the Institute for Genomics, Virginia Polytechnic Institute and State University, Blacksburg, Virginia 24061-0308, USA.
K M Bischoff
P J Kennelly
Virginia Tech · US

Funding

REGULATORY DOMAINS OF PROTEIN PHOSPHATASE-1R01GM055067 · NIGMS · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI KENNELLY, PETER J. · 1997 to 2004
$715k
NIGMS NIH HHS R01 GM055067NIGMS NIH HHS R01 GM55067
6 · The paper itself

Abstract

A set of open reading frames (ORFs) potentially encoding signal transduction proteins are clustered around icfG, a gene implicated in the regulation of carbon metabolism, in the genome of Synechocystis sp. strain PCC 6803. slr1860 is the ORF for icfG, whose predicted product resembles the protein phosphatases SpoIIE, RsbU, and RsbX from Bacillus subtilis. Bracketing slr1860/icfG are (i) ORF slr1861, whose predicted product resembles the SpoIIAB, RsbT, and RsbW protein kinases from B. subtilis, and (ii) ORFs slr1856 and slr1859, whose predicted products resemble the respective phosphoprotein substrates for the B. subtilis protein kinases: SpoIIAA, RsbS, and RsbV. In order to determine whether the protein products encoded by these ORFs possessed the functional capabilities suggested by sequence comparisons, each was expressed in Escherichia coli as a histidine-tagged fusion protein and analyzed for its ability to participate in protein phosphorylation-dephosphorylation processes in vitro. It was observed that ORF slr1861 encoded an ATP-dependent protein kinase capable of phosphorylating Slr1856 and, albeit with noticeably lower efficiency, Slr1859. Site-directed mutagenesis suggests that Slr1861 phosphorylated these proteins on Ser-54 and Ser-57, respectively. Slr1860 exhibited divalent metal ion-dependent protein-serine phosphatase activity. It catalyzed the dephosphorylation of Slr1856, but not Slr1859, in vitro.

Indexed as

Phosphoric Monoester HydrolasesSigma FactorTranscription FactorsAdenosine TriphosphateBacterial ProteinsCyanobacteriaDNA PrimersEnzyme ActivationEscherichia coliGene Expression Regulation, BacterialGene Expression Regulation, EnzymologicGenome, BacterialHydrolysisMagnesiumManganeseMolecular Sequence DataAdenosine TriphosphateBacterial ProteinsDNA PrimersICFG protein, SynechocystisMagnesiumManganesePhosphoprotein PhosphatasesPhosphoproteinsPhosphoric Monoester HydrolasesProtein KinasesRsbU protein, Bacillus subtilisSerineSigma FactorSlr1856 protein, SynechocystisSlr1859 protein, SynechocystisSlr1861 protein, SynechocystisspoIIR protein, Bacillus subtilisspore-specific proteins, BacillusTranscription Factors

Identifiers

PMID10438742
PMCPMC93959
OpenAlexW2149008782

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.