Evidence map›Paper›PMID 10437823›Full record

ArticlePlant molecular biology1999

Mutation of GT-1 binding sites in the Pr-1A promoter influences the level of inducible gene expression in vivo.

A S Buchel, F T Brederode, J F Bol, H J Linthorst

Abstract read
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In one paragraph

Article in Plant molecular biology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.5field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 69 citations in OpenAlex.

  1. Article
  2. Genetic mapping reveals a candidate geneFrontiers in plant science · 2024
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  3. GUS Reporter-Aided Promoter Deletion Analysis ofInternational journal of molecular sciences · 2023
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  4. Article
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  6. Frontiers in plant science · 2019
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  7. Article
  8. Article
  9. Ectopic Expression ofFrontiers in plant science · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

A S BuchelInstitute of Molecular Plant Sciences, Gorlaeus Laboratories, Leiden University, Netherlands.
F T Brederode
J F Bol
H J Linthorst
Leiden University · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Infection of Nicotiana tabacum Samsun NN with tobacco mosaic virus (TMV) results in a hypersensitive plant response and leads to systemic acquired resistance (SAR). The induction of SAR is mediated by the plant hormone salicylic acid (SA) and is accompanied by the induced expression of a number of genes including the pathogenesis-related (PR) gene 1a. Previously, it has been found that TMV infection and SA treatment resulted in a reduction of binding of nuclear protein GT-1 to far-upstream regions (-902 to -656) of the PR-1a gene. To test if GT-1 is a negative regulator of PR-1a gene expression, the effects of mutations in the seven putative GT-1 binding sites in this region were studied in vitro using dimethyl sulfate interference footprinting and band shift assays. This showed that at least one of the seven sites is indeed a GT-1 binding site. However, when tested in transgenic plants, the mutations did not result in constitutive expression of the chimeric PR-1a/GUS transgene, while inducible expression after SA treatment was decreased. The results suggest that binding of GT-1-like proteins to far-upstream PR-1a promoter regions indeed influences gene expression. A possible model for GT-1's mode of action in PR-1a gene expression is discussed.

Indexed as

Base SequenceBinding SitesDNA-Binding ProteinsDNA, PlantGene ExpressionGenes, PlantMolecular Sequence DataNicotianaNuclear ProteinsPlant DiseasesPlants, Genetically ModifiedPlants, ToxicPoint MutationPromoter Regions, GeneticSalicylic AcidTobacco Mosaic VirusDNA-Binding ProteinsDNA, PlantGT-1 transcription factorNuclear ProteinsSalicylic AcidTranscription Factors

Identifiers

PMID10437823
OpenAlexW306412909

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.