Evidence map›Paper›PMID 10430883›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1999

Expression cloning of a human alpha1, 4-N-acetylglucosaminyltransferase that forms GlcNAcalpha1-->4Galbeta-->R, a glycan specifically expressed in the gastric gland mucous cell-type mucin.

J Nakayama, J C Yeh, A K Misra, S Ito, T Katsuyama, M Fukuda

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 107 citations in OpenAlex.

  1. Trial
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  11. Decreased Gastric Gland Mucin-specificActa histochemica et cytochemica · 2021
    Article
  12. Article
  13. Review
  14. Article
  15. Review
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  18. Review
  19. Binding ofMicroorganisms · 2018
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

J NakayamaDepartment of Laboratory Medicine, Shinshu University School of Medicine, Matsumoto 390-8621, Japan. jun@hsp.md.shinshu-u.ac.jp
J C Yeh
A K Misra
S Ito
T Katsuyama
M Fukuda
Shinshu University Hospital · JP

Funding

THE A(1,3)FUCOSYLTRANSFERASE GENES AND SELECTIN LIGAND EXPRESSIONP01CA071932 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI LOWE, JOHN B · 1996 to 2012
$15.5M
Polylactosamines in Development and CancerR01CA048737 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI FUKUDA, MINORU · 1989 to 2007
$3.1M
GLYCOPROTEINS IN DIFFERENTIATION AND ONCOGENESISR37CA033000 · NCI · BURNHAM INSTITUTE FOR MEDICAL RESEARCH · PI FUKUDA, MINORU · 1995 to 2004
$2.1M
GLYCOPROTEINS IN DIFFERENTIATION AND ONCOGENESISR01CA033000 · NCI · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI FUKUDA, MINORU · 1985 to 2009
$1.8M
NCI NIH HHS CA33000NCI NIH HHS CA48737NCI NIH HHS CA71932NCI NIH HHS P01 CA071932NCI NIH HHS R01 CA033000NCI NIH HHS R01 CA048737NCI NIH HHS R37 CA033000
6 · The paper itself

Abstract

Among mucus-secreting cells, the gastric gland mucous cells, Brunner's glands, accessory glands of pancreaticobiliary tract, and pancreatic ducts exhibiting gastric metaplasia are unique in that they express class III mucin identified by paradoxical Con A staining composed of periodate oxidation, sodium borohydride reduction, Con A, and horseradish peroxidase reaction. Recently it was shown that these mucous cells secrete glycoproteins having GlcNAcalpha1-->4Galbeta-->R at nonreducing terminals of the carbohydrate moieties. Herein we describe the expression cloning of a cDNA encoding a human alpha1,4-N-acetylglucosaminyltransferase (alpha4GnT), a key enzyme for the formation of GlcNAcalpha1-->4Galbeta1-->R. COS-1 cells were thus cotransfected with a stomach cDNA library and a leukosialin cDNA. Transfected COS-1 cells were screened by using monoclonal antibodies specific for GlcNAcalpha1-->4Galbeta-->R and enriched by fluorescence-activated cell sorting. Sibling selection of recovered plasmids resulted in a cDNA clone that directs the expression of GlcNAcalpha1-->4Galbeta-->R. The deduced amino acid sequence predicts a type II membrane protein with 340 amino acids, showing no significant similarity with any other proteins. The alpha4GnT gene is located at chromosome 3p14.3, and its transcripts are expressed in the stomach and pancreas. An in vitro GlcNAc transferase assay by using a soluble alpha4GnT revealed that alpha1,4-linked GlcNAc residues are transferred most efficiently to core 2 branched O-glycans (Galbeta1-->4GlcNAcbeta1-->6(Galbeta1-->3)GalNAc), forming GlcNAcalpha1-->4Galbeta1-->4GlcNAcbeta1-->6(GlcNAca lpha1-->4Galbeta1- ->3)GalNAc. Transfection of alpha4GnT cDNA into gastric adenocarcinoma AGS cells produced class III mucin, indicating that alpha4GnT is responsible for the formation of class III Con A reactivity. These results indicate that the alpha4GnT is a glycosyltransferase that forms alpha1,4-linked GlcNAc residues, preferentially in O-glycans.

Indexed as

Chromosomes, Human, Pair 3AdultAmino Acid SequenceAnimalsBase SequenceCarbohydrate ConformationCarbohydrate SequenceCell MembraneChromosome MappingCloning, MolecularCOS CellsFemaleGastric MucosaGene Expression Regulation, EnzymologicHumansMaleN-AcetylglucosaminyltransferasesPolysaccharidesRecombinant Proteins

Identifiers

PMID10430883
PMCPMC17720
OpenAlexW2158781658

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.