Evidence map›Paper›PMID 10430572›Full record

ArticleGenetics1999

Genetic identification of three ABC transporters as essential elements for nitrate respiration in Haloferax volcanii.

C Wanner, J Soppa

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Genetics, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 39 citations in OpenAlex.

  1. Studying the long-term adaptation ofFrontiers in microbiology · 2025
    Article
  2. Article
  3. Review
  4. Article
  5. Article
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  7. Article
  8. An Arabidopsis thaliana high-affinity molybdate transporter required for efficient uptake of molybdate from soil.Proceedings of the National Academy of Sciences of the United States of America · 2007
    Article
  9. Insights into ABC transport in archaea.Journal of bioenergetics and biomembranes · 2004
    Review
  10. Review
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

C WannerBiozentrum Niederursel, Institut für Mikrobiologie, J. W. Goethe-Universität D-60439 Frankfurt, Germany.
J Soppa
Goethe University Frankfurt · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

More than 40 nitrate respiration-deficient mutants of Haloferax volcanii belonging to three different phenotypic classes were isolated. All 15 mutants of the null phenotype were complemented with a genomic library of the wild type. Wild-type copies of mutated genes were recovered from complemented mutants using two different approaches. The DNA sequences of 13 isolated fragments were determined. Five fragments were found to overlap; therefore nine different genomic regions containing genes essential for nitrate respiration could be identified. Three genomic regions containing genes coding for subunits of ABC transporters were further characterized. In two cases, genes coding for an ATP-binding subunit and a permease subunit were clustered and overlapped by four nucleotides. The third gene for a permease subunit had no additional ABC transporter gene in proximity. One ABC transporter was found to be glucose specific. The mutant reveals that the ABC transporter solely mediates anaerobic glucose transport. Based on sequence similarity, the second ABC transporter is proposed to be molybdate specific, explaining its essential role in nitrate respiration. The third ABC transporter is proposed to be anion specific. Genome sequencing has shown that ABC transporters are widespread in Archaea. Nevertheless, this study represents only the second example of a functional characterization.

Indexed as

Adenosine TriphosphateAmino Acid SequenceAnionsArchaeal ProteinsArginineATP-Binding Cassette TransportersBinding SitesEnergy MetabolismEscherichia coliGenetic Complementation TestGlucoseHaloferax volcaniiMolecular Sequence DataMolybdenumNitratesOpen Reading FramesAdenosine TriphosphateAnionsArchaeal ProteinsArginineATP-Binding Cassette TransportersGlucosemolybdateMolybdenumNitrates

Identifiers

PMID10430572
PMCPMC1460679
OpenAlexW2111969741

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.