Evidence map›Paper›PMID 10419974›Full record

ArticleJournal of bacteriology1999

The Streptomyces peucetius dpsC gene determines the choice of starter unit in biosynthesis of the daunorubicin polyketide.

W Bao, P J Sheldon, E Wendt-Pienkowski, C R Hutchinson

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 62 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Biosynthesis of Polyketides inMicroorganisms · 2019
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Biosynthesis of aromatic polyketides in bacteria.Accounts of chemical research · 2009
    Review
  13. Evolution of polyketide synthases in bacteria.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
  14. Article
  15. Engineered biosynthesis of aklanonic acid analogues.Journal of the American Chemical Society · 2005
    Article
  16. Article
  17. Engineering anthracycline biosynthesis toward angucyclines.Antimicrobial agents and chemotherapy · 2003
    Article
  18. Biosynthesis of polyketides in heterologous hosts.Microbiology and molecular biology reviews : MMBR · 2001
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

W BaoSchool of Pharmacy, University of Wisconsin, Madison, Wisconsin 53706, USA.
P J Sheldon
E Wendt-Pienkowski
C R Hutchinson
University of Wisconsin–Madison · US

Funding

BIOSYNTHESIS OF AROMATIC POLYKETIDESR01CA035381 · NCI · UNIVERSITY OF WISCONSIN MADISON · PI SIH, CHARLES J · 1985 to 2001
$446k
NCI NIH HHS CA35381
6 · The paper itself

Abstract

The starter unit used in the biosynthesis of daunorubicin is propionyl coenzyme A (CoA) rather than acetyl-CoA, which is used in the production of most of the bacterial aromatic polyketides studied to date. In the daunorubicin biosynthesis gene cluster of Streptomyces peucetius, directly downstream of the genes encoding the beta-ketoacyl:acyl carrier protein synthase subunits, are two genes, dpsC and dpsD, encoding proteins that are believed to function as the starter unit-specifying enzymes. Recombinant strains containing plasmids carrying dpsC and dpsD, in addition to other daunorubicin polyketide synthase (PKS) genes, incorporate the correct starter unit into polyketides made by these genes, suggesting that, contrary to earlier reports, the enzymes encoded by dpsC and dpsD play a crucial role in starter unit specification. Additionally, the results of a cell-free synthesis of 21-carbon polyketides from propionyl-CoA and malonyl-CoA that used the protein extracts of recombinant strains carrying other daunorubicin PKS genes to which purified DpsC was added suggest that this enzyme has the primary role in starter unit discrimination for daunorubicin biosynthesis.

Indexed as

Acyl Coenzyme ABacterial ProteinsCodon, TerminatorDaunorubicinDNA PrimersGenes, BacterialMalonyl Coenzyme AMultienzyme ComplexesMultigene FamilyPlasmidsPolymerase Chain ReactionProtein BiosynthesisStreptomycesAcyl Coenzyme ABacterial ProteinsCodon, TerminatorDaunorubicindaunorubicin-doxorubicin polyketide synthaseDNA PrimersMalonyl Coenzyme AMultienzyme Complexespropionyl-coenzyme A

Identifiers

PMID10419974
PMCPMC103607
OpenAlexW2111053271

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.