Evidence map›Paper›PMID 10414983›Full record

ArticleThe Journal of neuroscience : the official journal of the Society for Neuroscience1999

Autoregulatory sequences are revealed by complex stability screening of the mouse brn-3.0 locus.

M Trieu, J M Rhee, N Fedtsova, E E Turner

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of neuroscience : the official journal of the Society for Neuroscience, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
0.9field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 38 citations in OpenAlex.

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  8. Brn3a regulates the transition from neurogenesis to terminal differentiation and represses non-neural gene expression in the trigeminal ganglion.Developmental dynamics : an official publication of the American Association of Anatomists · 2009
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  13. Brn3a-expressing retinal ganglion cells project specifically to thalamocortical and collicular visual pathways.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2005
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  19. Defects in sensory axon growth precede neuronal death in Brn3a-deficient mice.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2001
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

M TrieuDepartment of Psychiatry, University of California San Diego, La Jolla, California 92093-0603, USA.
J M Rhee
N Fedtsova
E E Turner
University of California, San Diego · USSan Francisco VA Medical Center · US

Funding

FELLOWSHIP IN GERIATRIC MENTAL HEALTHT32MH019934 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Elizabeth W Twamley · 1994 to 2026
$9.5M
TRANSCRIPTION FACTORS IN CONTROL OF BRAIN DEVELOPMENTR01HD033442 · NICHD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI TURNER, ERIC E. · 1997 to 2010
$2.5M
TRANSCRIPTIONAL REGULATION OF BRAIN DEVELOPMENTK02MH001581 · NIMH · UNIVERSITY OF CALIFORNIA SAN DIEGO · PI TURNER, ERIC E. · 1998 to 2002
$291k
TRANSCRIPTIONAL CONTROL OF NEURONAL SURVIVAL IN THE CNSR03MH058447 · NIMH · UNIVERSITY OF CALIFORNIA SAN DIEGO · PI TURNER, ERIC E. · 1997 to 1998
–
NICHD NIH HHS R01 HD033442NIMH NIH HHS 5-T32-MH19934NIMH NIH HHS MH01581NIMH NIH HHS MH58447NIMH NIH HHS T32 MH019934
6 · The paper itself

Abstract

The POU-IV or Brn-3 class of transcription factors exhibit conserved structure, DNA-binding properties, and expression in specific subclasses of neurons across widely diverged species. In the mouse CNS, Brn-3.0 expression characterizes specific neurons from neurogenesis through the life of the cell. This irreversible activation of expression suggests positive autoregulation. To search for cis-acting elements that could mediate autoregulation we used a novel method, complex stability screening, which we applied to rapidly identify functional Brn-3.0 recognition sites within a large genomic region encompassing the mouse brn-3.0 locus. This method is based on the observation that the kinetic stability of Brn-3.0 complexes with specific DNA sequences, as measured by their dissociation half-lives, is highly correlated with the ability of those sequences to mediate transcriptional activation by Brn-3.0. The principal Brn-3.0 autoregulatory region lies approximately 5 kb upstream from the Brn-3.0 transcription start site and contains multiple Brn-3.0-binding sites that strongly resemble the optimal binding site for this protein class. This region also mediates transactivation by the closely related protein Brn-3.2, suggesting a regulatory cascade of POU proteins in specific neurons in which Brn-3.2 expression precedes Brn-3.0.

Indexed as

Genetic TechniquesHomeodomain ProteinsAgingAnimalsChromosome MappingDNADNA-Binding ProteinsDrug StabilityEmbryo, MammalianEmbryonic and Fetal DevelopmentGenomeHomeostasisImmunohistochemistryMiceTime FactorsTranscriptional ActivationDNADNA-Binding ProteinsHomeodomain ProteinsPou4f1 protein, mousePou4f2 protein, mouseTranscription Factor Brn-3Transcription Factor Brn-3ATranscription Factor Brn-3BTranscription Factors

Identifiers

PMID10414983
PMCPMC6782789
OpenAlexW1868833618

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.