Evidence map›Paper›PMID 10409756›Full record

ArticleMolecular and cellular biology1999

Stability of the human fragile X (CGG)(n) triplet repeat array in Saccharomyces cerevisiae deficient in aspects of DNA metabolism.

P J White, R H Borts, M C Hirst

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 95 citations in OpenAlex.

  1. The polyG diseases: a new disease entity.Acta neuropathologica communications · 2022
    Review
  2. Review
  3. Review
  4. Article
  5. Review
  6. Article
  7. The balancing act of DNA repeat expansions.Current opinion in genetics & development · 2013
    Review
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. FMR1: a gene with three faces.Biochimica et biophysica acta · 2009
    Review
  14. Comparative genomics and molecular dynamics of DNA repeats in eukaryotes.Microbiology and molecular biology reviews : MMBR · 2008
    Review
  15. Article
  16. Article
  17. Replication fork stalling at natural impediments.Microbiology and molecular biology reviews : MMBR · 2007
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

P J WhiteFragile X Group, Institute of Molecular Medicine, University of Oxford, John Radcliffe Hospital, Headington, Oxford OX3 9DS, United Kingdom.
R H Borts
M C Hirst
John Radcliffe Hospital · GBNational Fragile X Foundation · US

Funding

Wellcome Trust
6 · The paper itself

Abstract

Expanded trinucleotide repeats underlie a growing number of human diseases. The human FMR1 (CGG)(n) array can exhibit genetic instability characterized by progressive expansion over several generations leading to gene silencing and the development of the fragile X syndrome. While expansion is dependent upon the length of uninterrupted (CGG)(n), instability occurs in a limited germ line and early developmental window, suggesting that lineage-specific expression of other factors determines the cellular environment permissive for expansion. To identify these factors, we have established normal- and premutation-length human FMR1 (CGG)(n) arrays in the yeast Saccharomyces cerevisiae and assessed the frequency of length changes greater than 5 triplets in cells deficient in various DNA repair and replication functions. In contrast to previous studies with Escherichia coli, we observed a low frequency of orientation-dependent large expansions in arrays carrying long uninterrupted (CGG)(n) arrays in a wild-type background. This frequency was unaffected by deletion of several DNA mismatch repair genes or deletion of the EXO1 and DIN7 genes and was not enhanced through meiosis in a wild-type background. Array contraction occurred in an orientation-dependent manner in most mutant backgrounds, but loss of the Sgs1p resulted in a generalized increase in array stability in both orientations. In contrast, FMR1 arrays had a 10-fold-elevated frequency of expansion in a rad27 background, providing evidence for a role in lagging-strand Okazaki fragment processing in (CGG)(n) triplet repeat expansion.

Indexed as

DNA RepairExodeoxyribonucleasesRNA-Binding ProteinsSaccharomyces cerevisiae ProteinsTrinucleotide RepeatsTyrosine 3-Monooxygenase14-3-3 ProteinsCheckpoint Kinase 1DNA, FungalDNA HelicasesDNA, RecombinantEscherichia coliFragile X Messenger Ribonucleoprotein 1Fragile X SyndromeFungal ProteinsHumans14-3-3 ProteinsCheckpoint Kinase 1CHEK1 protein, humanDIN7 protein, S cerevisiaeDNA, FungalDNA HelicasesDNA, RecombinantExodeoxyribonucleasesFMR1 protein, humanFragile X Messenger Ribonucleoprotein 1Fungal ProteinsNerve Tissue ProteinsProtein KinasesProteinsRecQ HelicasesRNA-Binding ProteinsSaccharomyces cerevisiae ProteinsSGS1 protein, S cerevisiaeTyrosine 3-Monooxygenase

Identifiers

PMID10409756
PMCPMC84419
OpenAlexW2135180107

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.