Evidence map›Paper›PMID 10400603›Full record

ArticleJournal of bacteriology1999

Physicochemical evidence that Treponema pallidum TroA is a zinc-containing metalloprotein that lacks porin-like structure.

R K Deka, Y H Lee, K E Hagman, D Shevchenko, C A Lingwood, C A Hasemann, M V Norgard, J D Radolf

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Manganese uptake and streptococcal virulence.Biometals : an international journal on the role of metal ions in biology, biochemistry, and medicine · 2015
    Review
  6. Review
  7. Varied metal-binding properties of lipoprotein PsaA in Streptococcus pneumoniae.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2014
    Article
  8. Article
  9. Article
  10. Article
  11. Biological basis for syphilis.Clinical microbiology reviews · 2006
    Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. The Treponema pallidum Outer Membrane.Current topics in microbiology and immunology
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

R K DekaDepartments of Microbiology, The University of Texas Southwestern Medical Center, Dallas, Texas 75235, USA.
Y H Lee
K E Hagman
D Shevchenko
C A Lingwood
C A Hasemann
M V Norgard
J D Radolf
The University of Texas Southwestern Medical Center · USHospital for Sick Children · CA

Funding

Treponema pallidum Outer Membrane Proteins and Transition Metal AcquisitionR01AI026756 · NIAID · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI RADOLF, JUSTIN D · 1992 to 2017
$5.1M
MOLECULAR ANALYSIS OF T PALLIDUM MEMBRANE PROTEINSR01AI016692 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI NORGARD, MICHAEL V. · 1986 to 2009
$4.6M
T.pallidum Membrane Immunogens and Anti-Oxidant DefenseR37AI026756 · NIAID · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI RADOLF, JUSTIN D · 2002 to 2006
$1.8M
MEMBRANE PROTEINS OF TREPONEMA PALLIDUMR29AI026756 · NIAID · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI RADOLF, JUSTIN D. · 1988 to 1991
–
NIAID NIH HHS AI-16692NIAID NIH HHS AI-26756NIAID NIH HHS R01 AI016692NIAID NIH HHS R01 AI026756NIAID NIH HHS R37 AI026756NIDDK NIH HHS DK-52089
6 · The paper itself

Abstract

Although TroA (Tromp1) was initially reported to be a Treponema pallidum outer membrane protein with porin-like properties, subsequent studies have suggested that it actually is a periplasmic substrate-binding protein involved in the transport of metals across the treponemal cytoplasmic membrane. Here we conducted additional physicochemical studies to address the divergent viewpoints concerning this protein. Triton X-114 phase partitioning of recombinant TroA constructs with or without a signal sequence corroborated our prior contention that the native protein's amphiphilic behavior is due to its uncleaved leader peptide. Whereas typical porins are trimers with extensive beta-barrel structure, size exclusion chromatography and circular dichroism spectroscopy revealed that TroA was a monomer and predominantly alpha-helical. Neutron activation, atomic absorption spectroscopy, and anomalous X-ray scattering all demonstrated that TroA binds zinc in a 1:1 molar stoichiometric ratio. TroA does not appear to possess structural features consistent with those of bacterial porins.

Indexed as

Bacterial ProteinsCircular DichroismMetalloproteinsOctoxynolPolyethylene GlycolsPorinsSpectrometry, X-Ray EmissionSpectrophotometry, AtomicTreponema pallidumZincBacterial ProteinsMetalloproteinsNonidet P-40OctoxynolPolyethylene GlycolsPorinsTromp1 protein, Treponema pallidumZinc

Identifiers

PMID10400603
PMCPMC93947
OpenAlexW1529464592

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.