Evidence map›Paper›PMID 10397763›Full record

ArticleMolecular biology of the cell1999

The plant vesicle-associated SNARE AtVTI1a likely mediates vesicle transport from the trans-Golgi network to the prevacuolar compartment.

H Zheng, G F von Mollard, V Kovaleva, T H Stevens, N V Raikhel

Abstract read
In one paragraph

Article in Molecular biology of the cell, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 120 citations in OpenAlex.

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  14. Plant vacuole morphology and vacuolar trafficking.Frontiers in plant science · 2014
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

H ZhengDepartment of Energy-Plant Research Laboratory, Michigan State University, East Lansing, Michigan 48824, USA.
G F von Mollard
V Kovaleva
T H Stevens
N V Raikhel
Michigan State University · USUniversity of Oregon · US

Funding

Cell Biological Study of Eukaryotic Organelle AssemblyR37GM032448 · NIGMS · UNIVERSITY OF OREGON · PI STEVENS, TOM HALL · 2003 to 2012
$3.6M
CELL BIOLOGICAL STUDY OF EUKARYOTIC ORGANELLE ASSEMBLYR01GM032448 · NIGMS · UNIVERSITY OF OREGON · PI STEVENS, TOM HALL · 1985 to 2002
$970k
NIGMS NIH HHS GM 32448NIGMS NIH HHS R01 GM032448NIGMS NIH HHS R37 GM032448
6 · The paper itself

Abstract

Membrane traffic in eukaryotic cells relies on recognition between v-SNAREs on transport vesicles and t-SNAREs on target membranes. Here we report the identification of AtVTI1a and AtVTI1b, two Arabidopsis homologues of the yeast v-SNARE Vti1p, which is required for multiple transport steps in yeast. AtVTI1a and AtVTI1b share 60% amino acid identity with one another and are 32 and 30% identical to the yeast protein, respectively. By suppressing defects found in specific strains of yeast vti1 temperature-sensitive mutants, we show that AtVTI1a can substitute for Vti1p in Golgi-to-prevacuolar compartment (PVC) transport, whereas AtVTI1b substitutes in two alternative pathways: the vacuolar import of alkaline phosphatase and the so-called cytosol-to-vacuole pathway used by aminopeptidase I. Both AtVTI1a and AtVTI1b are expressed in all major organs of Arabidopsis. Using subcellular fractionation and immunoelectron microscopy, we show that AtVTI1a colocalizes with the putative vacuolar cargo receptor AtELP on the trans-Golgi network and the PVC. AtVTI1a also colocalizes with the t-SNARE AtPEP12p to the PVC. In addition, AtVTI1a and AtPEP12p can be coimmunoprecipitated from plant cell extracts. We propose that AtVTI1a functions as a v-SNARE responsible for targeting AtELP-containing vesicles from the trans-Golgi network to the PVC, and that AtVTI1b is involved in a different membrane transport process.

Indexed as

Arabidopsis ProteinsAmino Acid SequenceArabidopsisBiological TransportCarrier ProteinsCell CompartmentationEpitopesGene Expression Regulation, PlantGolgi ApparatusMembrane ProteinsMolecular Sequence DataPlant ProteinsPlants, Genetically ModifiedPrecipitin TestsQb-SNARE ProteinsRecombinant ProteinsArabidopsis ProteinsCarrier ProteinsELP protein, ArabidopsisEpitopesMembrane ProteinsPlant ProteinsQb-SNARE ProteinsRecombinant ProteinsSucrosevesicle transport v-SNARE 11 protein, Arabidopsisvesicle transport v-SNARE 12 protein, Arabidopsis

Identifiers

PMID10397763
PMCPMC25440
OpenAlexW2115013836

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.