Evidence map›Paper›PMID 10394950›Full record

ArticlePlant molecular biology1999

Characterization of three distinct cDNA clones encoding cysteine proteinases from maize (Zea mays L.) callus.

T Pechan, B Jiang, D Steckler, L Ye, L Lin, D S Luthe, W P Williams

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Plant molecular biology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Phytophthora infestans effector AVRblb2 prevents secretion of a plant immune protease at the haustorial interface.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Insect feeding mobilizes a unique plant defense protease that disrupts the peritrophic matrix of caterpillars.Proceedings of the National Academy of Sciences of the United States of America · 2002
    Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

T PechanDepartment of Biochemistry and Molecular Biology, Mississippi State University, MS 39762, USA.
B Jiang
D Steckler
L Ye
L Lin
D S Luthe
W P Williams

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In previous work, a 33 kDa cysteine proteinase was found in callus initiated from maize (Zea mays L.) resistant to fall armyworm feeding. A callus cDNA library from the maize inbred Mp708 was screened with oligonucleotides derived from the N-terminal amino acid sequence of the 33 kDa proteinase and several cDNA clones were isolated and sequenced. A cDNA clone encoding the 33 kDa cysteine proteinase, mir1, was identified. Two additional clones, mir2 and mir3, encoding putative cysteine proteinases were also identified. mir2 and mir3 are distinct from mir1 and each other, but show a high degree of homology. All of the mir cDNA clones map to distinct sites on the maize genome. Amino acid sequences encoded by the mir clones are similar to other known cysteine proteinases and are most closely related to the oryzain-alpha and -beta precursors. The ERFNIN motif and a 12 amino acid conserved sequence are present in the propeptide region of the putative proteinases encoded by mir clones. mir2 and mir3 appear to have C-terminal extensions. The phylogenetic tree of nucleotide sequences of mir1, mir2, mir3 and other representative cysteine proteinases from protozoa, plants and animals was constructed.

Indexed as

Amino Acid SequenceCloning, MolecularCysteine EndopeptidasesDNA, ComplementaryEvolution, MolecularGene LibraryMolecular Sequence DataSequence Analysis, DNASequence Homology, Amino AcidZea maysCysteine EndopeptidasesDNA, Complementary

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.