ArticleGenetics1999
Genome mapping in capsicum and the evolution of genome structure in the solanaceae.
Article in Genetics, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 112 papers.
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Who cites it
112 citing papers in PubMed.
- A physical map of traits of agronomic importance based on potato and tomato genome sequences.Frontiers in genetics · 2023Review
- Application of the RAPD technique to identify genetic diversity in cultivated forms ofBiotechnologia · 2021Article
- Chromosome Evolution in the Family Solanaceae.Frontiers in plant science · 2021Review
- Transcriptomic analysis of a wild and a cultivated varieties of Capsicum annuum over fruit development and ripening.PloS one · 2021Article
- Multi-Environment Quantitative Trait Loci Mapping for Grain Iron and Zinc Content Using Bi-parental Recombinant Inbred Line Mapping Population in Pearl Millet.Frontiers in plant science · 2021Article
- Overview of Biotic Stresses in Pepper (International journal of molecular sciences · 2020Review
- Molecular mapping of dominant gene responsible for leaf curl virus resistance in chilli pepper (3 Biotech · 2020Article
- Article
- Nucleotide sequence polymorphism in theJournal of genetics · 2019Article
- Article
- Whole Genome Resequencing of Capsicum baccatum and Capsicum annuum to Discover Single Nucleotide Polymorphism Related to Powdery Mildew Resistance.Scientific reports · 2018Article
- Comparative Oligo-FISH Mapping: An Efficient and Powerful Methodology To Reveal Karyotypic and Chromosomal Evolution.Genetics · 2018Article
- Identification ofFrontiers in plant science · 2018Article
- Analysis of the potato calcium-dependent protein kinase family and characterization of StCDPK7, a member induced upon infection with Phytophthora infestans.Plant cell reports · 2017Article
- Genetic and biochemical analysis reveals linked QTLs determining natural variation for fruit post-harvest water loss in pepper (Capsicum).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017Article
- Conservation and Dispersion of Genes Conferring Resistance to Tomato Begomoviruses between Tomato and Pepper Genomes.Frontiers in plant science · 2017Article
- Large-scale development of SSR markers in tobacco and construction of a linkage map in flue-cured tobacco.Breeding science · 2016Article
- "Islands of Divergence" in the Atlantic Cod Genome Represent Polymorphic Chromosomal Rearrangements.Genome biology and evolution · 2016Article
- Gene-based SNP discovery in tepary bean (Phaseolus acutifolius) and common bean (P. vulgaris) for diversity analysis and comparative mapping.BMC genomics · 2016Article
- Mapping Quantitative Trait Loci Controlling High Iron and Zinc Content in Self and Open Pollinated Grains of Pearl Millet [Frontiers in plant science · 2016Article
52 more citing papers are in PubMed but not listed here.
Corrections and comments
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Authors and funding
5 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
We have created a genetic map of Capsicum (pepper) from an interspecific F2 population consisting of 11 large (76.2-192.3 cM) and 2 small (19.1 and 12.5 cM) linkage groups that cover a total of 1245.7 cM. Many of the markers are tomato probes that were chosen to cover the tomato genome, allowing comparison of this pepper map to the genetic map of tomato. Hybridization of all tomato-derived probes included in this study to positions throughout the pepper map suggests that no major losses have occurred during the divergence of these genomes. Comparison of the pepper and tomato genetic maps showed that 18 homeologous linkage blocks cover 98.1% of the tomato genome and 95.0% of the pepper genome. Through these maps and the potato map, we determined the number and types of rearrangements that differentiate these species and reconstructed a hypothetical progenitor genome. We conclude there have been 30 breaks as part of 5 translocations, 10 paracentric inversions, 2 pericentric inversions, and 4 disassociations or associations of genomic regions that differentiate tomato, potato, and pepper, as well as an additional reciprocal translocation, nonreciprocal translocation, and a duplication or deletion that differentiate the two pepper mapping parents.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.