Evidence map›Paper›PMID 10388831›Full record

ArticleGenetics1999

A maize map standard with sequenced core markers, grass genome reference points and 932 expressed sequence tagged sites (ESTs) in a 1736-locus map.

G L Davis, M D McMullen, C Baysdorfer, T Musket, D Grant, M Staebell, G Xu, M Polacco, L Koster, S Melia-Hancock and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 86 papers.

0numbers the graph read from it
0cells of the map it votes in
86citing papers in PubMed
9.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

86 citing papers in PubMed, 241 citations in OpenAlex.

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  11. The genetic basis of flecking and its relationship to disease resistance in the IBM maize mapping population.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2015
    Article
  12. Genetic mapping of QTL for maize weevil resistance in a RIL population of tropical maize.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2015
    Article
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  16. Development of pachytene FISH maps for six maize chromosomes and their integration with other maize maps for insights into genome structure variation.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2012
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26 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

G L DavisUSDA-ARS, Midwest Area, Plant Genetics Research Unit, Columbia, Missouri 65211, USA.
M D McMullen
C Baysdorfer
T Musket
D Grant
M Staebell
G Xu
M Polacco
L Koster
S Melia-Hancock
K Houchins
S Chao
E H Coe
Agricultural Research Service · USPioneer Hi-Bred · USUniversity of Missouri · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We have constructed a 1736-locus maize genome map containing1156 loci probed by cDNAs, 545 probed by random genomic clones, 16 by simple sequence repeats (SSRs), 14 by isozymes, and 5 by anonymous clones. Sequence information is available for 56% of the loci with 66% of the sequenced loci assigned functions. A total of 596 new ESTs were mapped from a B73 library of 5-wk-old shoots. The map contains 237 loci probed by barley, oat, wheat, rice, or tripsacum clones, which serve as grass genome reference points in comparisons between maize and other grass maps. Ninety core markers selected for low copy number, high polymorphism, and even spacing along the chromosome delineate the 100 bins on the map. The average bin size is 17 cM. Use of bin assignments enables comparison among different maize mapping populations and experiments including those involving cytogenetic stocks, mutants, or quantitative trait loci. Integration of nonmaize markers in the map extends the resources available for gene discovery beyond the boundaries of maize mapping information into the expanse of map, sequence, and phenotype information from other grass species. This map provides a foundation for numerous basic and applied investigations including studies of gene organization, gene and genome evolution, targeted cloning, and dissection of complex traits.

Indexed as

Chromosome MappingExpressed Sequence TagsGenetic MarkersGenome, PlantModels, GeneticSequence Tagged SitesZea maysGenetic Markers

Identifiers

PMID10388831
PMCPMC1460676
OpenAlexW1946965338

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.