Evidence map›Paper›PMID 10388764›Full record

ArticleBiophysical journal1999

Divalent cation-, nucleotide-, and polymerization-dependent changes in the conformation of subdomain 2 of actin.

J Moraczewska, B Wawro, K Seguro, H Strzelecka-Golaszewska

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In one paragraph

Article in Biophysical journal, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Nucleotide-dependent conformational changes in the actin filament: Subtler than expected.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  3. Mechanism of actin polymerization revealed by cryo-EM structures of actin filaments with three different bound nucleotides.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. The structure of nonvertebrate actin: implications for the ATP hydrolytic mechanism.Proceedings of the National Academy of Sciences of the United States of America · 2003
    Article
  10. Actin-ATP hydrolysis is a major energy drain for neurons.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2003
    Article
  11. Article
  12. Article
  13. Article
  14. The oxidation produced by hydrogen peroxide on Ca-ATP-G-actin.Protein science : a publication of the Protein Society · 2000
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

J MoraczewskaDepartment of Muscle Biochemistry, Nencki Institute of Experimental Biology, PL-02-093 Warsaw, Poland.
B Wawro
K Seguro
H Strzelecka-Golaszewska
Instytut Biologii Doświadczalnej im. Marcelego Nenckiego · PLSuzuki (Japan) · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Conformational changes in subdomain 2 of actin were investigated using fluorescence probes dansyl cadaverine (DC) or dansyl ethylenediamine (DED) covalently attached to Gln41. Examination of changes in the fluorescence emission spectra as a function of time during Ca2+/Mg2+ and ATP/ADP exchange at the high-affinity site for divalent cation-nucleotide complex in G-actin confirmed a profound influence of the type of nucleotide but failed to detect a significant cation-dependent difference in the environment of Gln41. No significant difference between Ca- and Mg-actin was also seen in the magnitude of the fluorescence changes resulting from the polymerization of these two actin forms. Evidence is presented that earlier reported cation-dependent differences in the conformation of the loop 38-52 may be related to time-dependent changes in the conformation of subdomain 2 in DED- or DC-labeled G-actin, accelerated by substitution of Mg2+ for Ca2+ in CaATP-G-actin and, in particular, by conversion of MgATP- into MgADP-G-actin. These spontaneous changes are associated with a denaturation-driven release of the bound nucleotide that is promoted by two effects of DED or DC labeling: lowered affinity of actin for nucleotide and acceleration of ATP hydrolysis on MgATP-G-actin that converts it into a less stable MgADP form. Evidence is presented that the changes in the environment of Gln41 accompanying actin polymerization result in part from the release of Pi after the hydrolysis of ATP on the polymer. A similarity of this change to that accompanying replacement of the bound ATP with ADP in G-actin is discussed.

Indexed as

Protein ConformationActinsAdenosine DiphosphateAdenosine TriphosphateAnimalsCadaverineCalciumCations, DivalentDansyl CompoundsEthylenediaminesFluorescent DyesGlutamineKineticsMagnesiumMuscle, SkeletalNucleotidesActinsAdenosine DiphosphateAdenosine TriphosphateCadaverineCalciumCations, DivalentDansyl CompoundsdansylethylenediamineEthylenediaminesFluorescent DyesGlutamineMagnesiummonodansylcadaverineNucleotides

Identifiers

PMID10388764
PMCPMC1300336
OpenAlexW1965880798

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.