Evidence map›Paper›PMID 10357820›Full record

ArticleThe EMBO journal1999

Repression by Ikaros and Aiolos is mediated through histone deacetylase complexes.

J Koipally, A Renold, J Kim, K Georgopoulos

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 140 papers.

0numbers the graph read from it
0cells of the map it votes in
140citing papers in PubMed
33.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

140 citing papers in PubMed, 307 citations in OpenAlex.

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  12. Cis-regulatory control of mammalian Trps1 gene expression.Journal of experimental zoology. Part B, Molecular and developmental evolution · 2024
    Article
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  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Review

80 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

J KoipallyCutaneous Biology Research Center, Massachusetts General Hospital, Harvard Medical School, Charlestown, MA 02129, USA.
A Renold
J Kim
K Georgopoulos
Harvard University · US

Funding

REGULATION OF CD3D GENE BY T TRANSCRIPTION FACTOR IKAROSR01AI033062 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI GEORGOPOULOS, KATIA · 1993 to 2000
$248k
NIAID NIH HHS R01 AI033062NIAID NIH HHS R01 AI33062
6 · The paper itself

Abstract

Here we show that the lymphoid lineage-determining factors Ikaros and Aiolos can function as strong transcriptional repressors. This function is mediated through two repression domains and is dependent upon the promoter context and cell type. Repression by Ikaros proteins correlates with hypo-acetylation of core histones at promoter sites and is relieved by histone deacetylase inhibitors. Consistent with these findings, Ikaros and its repression domains can interact in vivo and in vitro with the mSin3 family of co-repressors which bind to histone deacetylases. Based on these and our recent findings of associations between Ikaros and Mi-2-HDAC, we propose that Ikaros family members modulate gene expression during lymphocyte development by recruiting distinct histone deacetylase complexes to specific promoters.

Indexed as

DNA-Binding ProteinsSaccharomyces cerevisiae ProteinsAcetylationAmino Acid SequenceAnimalsBinding SitesCell LineChromatinHistone Deacetylase InhibitorsHistone DeacetylasesHistonesHumansIkaros Transcription FactorLymphocytesMiceMolecular Sequence DataChromatinDNA-Binding ProteinsHistone Deacetylase InhibitorsHistone DeacetylasesHistonesIkaros Transcription FactorIKZF1 protein, humanIKZF3 protein, humanIkzf3 protein, mouseProtein IsoformsRepressor ProteinsRNA, MessengerSaccharomyces cerevisiae ProteinsSIN3 protein, S cerevisiaeTrans-ActivatorsTranscription FactorsZfpn1a1 protein, mouse

Identifiers

PMID10357820
PMCPMC1171390
OpenAlexW2064667001

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.