Evidence map›Paper›PMID 10357810›Full record

ArticleThe EMBO journal1999

Dislocation of membrane proteins in FtsH-mediated proteolysis.

A Kihara, Y Akiyama, K Ito

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 112 citations in OpenAlex.

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  8. Molecular insights into theThe Journal of biological chemistry · 2017
    Article
  9. Article
  10. Membrane proteases in the bacterial protein secretion and quality control pathway.Microbiology and molecular biology reviews : MMBR · 2012
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

A KiharaInstitute for Virus Research, Kyoto University, Sakyo-ku, Kyoto 606-8507, Japan.
Y Akiyama
K Ito
Kyoto University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Escherichia coli FtsH degrades several integral membrane proteins, including YccA, having seven transmembrane segments, a cytosolic N-terminus and a periplasmic C-terminus. Evidence indicates that FtsH initiates proteolysis at the N-terminal cytosolic domain. SecY, having 10 transmembrane segments, is also a substrate of FtsH. We studied whether and how the FtsH-catalyzed proteolysis on the cytosolic side continues into the transmembrane and periplasmic regions using chimeric proteins, YccA-(P3)-PhoA-His6-Myc and SecY-(P5)-PhoA, with the alkaline phosphatase (PhoA) mature sequence in a periplasmic domain. The PhoA domain that was present within the fusion protein was rapidly degraded by FtsH when it lacked the DsbA-dependent folding. In contrast, both PhoA itself and the TM9-PhoA region of SecY-(P5)-PhoA were stable when expressed as independent polypeptides. In the presence of DsbA, the FtsH-dependent degradation stopped at a site near to the N-terminus of the PhoA moiety, leaving the PhoA domain (and its C-terminal region) undigested. The efficiency of this degradation stop correlated well with the rapidity of the folding of the PhoA domain. Thus, both transmembrane and periplasmic domains are degraded by the processive proteolysis by FtsH, provided they are not tightly folded. We propose that FtsH dislocates the extracytoplasmic domain of a substrate, probably using its ATPase activity.

Indexed as

Escherichia coli ProteinsAdenosine TriphosphatasesAlkaline PhosphataseAmino Acid SequenceATP-Dependent ProteasesBacterial ProteinsCytoplasmDisulfidesEndopeptidase KEndopeptidasesEscherichia coliMembrane ProteinsMolecular Sequence DataMolecular WeightMutationPeptide FragmentsAdenosine TriphosphatasesAlkaline PhosphataseATP-Dependent ProteasesBacterial ProteinsDisulfidesEndopeptidase KEndopeptidasesEscherichia coli ProteinsFtsH protein, E coliMembrane ProteinsPeptide FragmentsProtein Disulfide-IsomerasesRecombinant Fusion ProteinsSEC Translocation ChannelsSecY protein, E coliTrypsinYccA protein, E coli

Identifiers

PMID10357810
PMCPMC1171379
OpenAlexW2070398484

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.