Evidence map›Paper›PMID 10339578›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1999

Adaptive evolution of color vision of the Comoran coelacanth (Latimeria chalumnae).

S Yokoyama, H Zhang, F B Radlwimmer, N S Blow

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed, 1 pooled it
11.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 1 synthesis or guideline pooled it, 157 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

S YokoyamaDepartment of Biology, Syracuse University, Syracuse, NY 13244, USA. syokoyam@mailbox.syr.edu
H Zhang
F B Radlwimmer
N S Blow
Syracuse University · USUniversity of California, Riverside · US

Funding

MOLECULAR EVOLUTION OF VISUAL PIGMENT GENES IN ASTYANAXR01GM042379 · NIGMS · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI YOKOYAMA, SHOZO · 1990 to 2002
$986k
NIGMS NIH HHS GM 42379NIGMS NIH HHS R01 GM042379
6 · The paper itself

Abstract

The coelacanth, a "living fossil," lives near the coast of the Comoros archipelago in the Indian Ocean. Living at a depth of about 200 m, the Comoran coelacanth receives only a narrow range of light, at about 480 nm. To detect the entire range of "color" at this depth, the coelacanth appears to use only two closely related paralogous RH1 and RH2 visual pigments with the optimum light sensitivities (lambdamax) at 478 nm and 485 nm, respectively. The lambdamax values are shifted about 20 nm toward blue compared with those of the corresponding orthologous pigments. Mutagenesis experiments show that each of these coadapted changes is fully explained by two amino acid replacements.

Indexed as

Adaptation, PhysiologicalColor PerceptionEvolution, MolecularAmino Acid SequenceAnimalsExonsFishesMammalsMolecular Sequence DataMutagenesis, Site-DirectedPhylogenyRecombinant ProteinsRestriction MappingRetinal PigmentsRod OpsinsSequence AlignmentRecombinant ProteinsRetinal PigmentsRod Opsins

Identifiers

PMID10339578
PMCPMC26872
OpenAlexW2071412636

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.