Evidence map›Paper›PMID 10330347›Full record

ArticleAmerican journal of human genetics1999

X-linked late-onset sensorineural deafness caused by a deletion involving OA1 and a novel gene containing WD-40 repeats.

M T Bassi, R S Ramesar, B Caciotti, I M Winship, A De Grandi, M Riboni, P L Townes, P Beighton, A Ballabio, G Borsani

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 105 citations in OpenAlex.

  1. Article
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  7. Article
  8. The Role of Thyroid Hormone in the Regulation of Cerebellar Development.Endocrinology and metabolism (Seoul, Korea) · 2021
    Article
  9. Review
  10. Review
  11. Review
  12. Article
  13. TBL1Y: a new gene involved in syndromic hearing loss.European journal of human genetics : EJHG · 2019
    Article
  14. A strategic research alliance: Turner syndrome and sex differences.American journal of medical genetics. Part C, Seminars in medical genetics · 2019
    Review
  15. Recent advances in research on isolated congenital central hypothyroidism.Clinical pediatric endocrinology : case reports and clinical investigations : official journal of the Japanese Society for Pediatric Endocrinology · 2019
    Article
  16. Article
  17. Review
  18. Mutations in TBL1X Are Associated With Central Hypothyroidism.The Journal of clinical endocrinology and metabolism · 2016
    Observational
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 3 countries.

M T BassiTelethon Institute of Genetics and Medicine, Milan, Italy.
R S Ramesar
B Caciotti
I M Winship
A De Grandi
M Riboni
P L Townes
P Beighton
A Ballabio
G Borsani
Telethon Institute Of Genetics And Medicine · ITSouth African Medical Research Council · ZAUniversity of Massachusetts Chan Medical School · USUniversity of Siena · ITVita-Salute San Raffaele University · IT

Funding

Telethon TGM06S01Telethon TGM97000
6 · The paper itself

Abstract

We have identified a novel gene, transducin (beta)-like 1 (TBL1), in the Xp22.3 genomic region, that shows high homology with members of the WD-40-repeat protein family. The gene contains 18 exons spanning approximately 150 kb of the genomic region adjacent to the ocular albinism gene (OA1) on the telomeric side. However, unlike OA1, TBL1 is transcribed from telomere to centromere. Northern analysis indicates that TBL1 is ubiquitously expressed, with two transcripts of approximately 2.1 kb and 6.0 kb. The open reading frame encodes a 526-amino acid protein, which shows the presence of six beta-transducin repeats (WD-40 motif) in the C-terminal domain. The homology with known beta-subunits of G proteins and other WD-40-repeat containing proteins is restricted to the WD-40 motif. Genomic analysis revealed that the gene is either partly or entirely deleted in patients carrying Xp22.3 terminal deletions. The complexity of the contiguous gene-syndrome phenotype shared by these patients depends on the number of known disease genes involved in the deletions. Interestingly, one patient carrying a microinterstitial deletion involving the 3' portion of both TBL1 and OA1 shows the OA1 phenotype associated with X-linked late-onset sensorineural deafness. We postulate an involvement of TBL1 in the pathogenesis of the ocular albinism with late-onset sensorineural deafness phenotype.

Indexed as

Gene DeletionGenetic LinkageX ChromosomeAmino Acid SequenceBase SequenceDeafnessDNA, ComplementaryEye ProteinsFemaleHumansMaleMembrane GlycoproteinsMolecular Sequence DataPedigreeSequence Homology, Amino AcidTransducinDNA, ComplementaryEye ProteinsGPR143 protein, humanMembrane GlycoproteinsTBL1X protein, humanTBL1Y protein, humanTransducin

Identifiers

PMID10330347
PMCPMC1377903
OpenAlexW2151431457

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.