Evidence map›Paper›PMID 10330129›Full record

ArticleGenome research1999

Fluorescence polarization in homogeneous nucleic acid analysis.

X Chen, L Levine, P Y Kwok

Open access · bronzeAbstract read
In one paragraph

Article in Genome research, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 145 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
145citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

145 citing papers in PubMed, 1 synthesis or guideline pooled it, 394 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Trial
  4. Functional interferon-epsilon gene polymorphisms and sexually transmitted infections of the endometrium.American journal of reproductive immunology (New York, N.Y. : 1989) · 2023
    Article
  5. Article
  6. Nanomaterials Used in Fluorescence Polarization Based Biosensors.International journal of molecular sciences · 2022
    Review
  7. Observational
  8. Article
  9. Article
  10. Article
  11. Communications biology · 2019
    Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

85 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

X ChenDivision of Dermatology and Department of Genetics, Washington University School of Medicine, St. Louis, Missouri 63110, USA. sam@psts.wustl.edu
L Levine
P Y Kwok
Monsanto (United States) · US

Funding

TECHNOLOGIES FOR DIALLELIC MARKER DISCOVERY AND TESTINGR01HG001720 · NHGRI · WASHINGTON UNIVERSITY · PI KWOK, PUI-YAN · 1997 to 2007
$9.6M
NEW METHODS FOR HIGH THROUGHPUT GENOME ANALYSISR01EY012557 · NEI · WASHINGTON UNIVERSITY · PI KWOK, PUI-YAN · 1999 to 2001
$366k
NEI NIH HHS R01-EY12557NHGRI NIH HHS F32-HG156NHGRI NIH HHS R01 HG001720NHGRI NIH HHS R01-HG1720
6 · The paper itself

Abstract

A new method for DNA diagnostics based on template-directed primer extension and detection by fluorescence polarization is described. In this method, amplified genomic DNA containing a polymorphic locus is incubated with oligonucleotide primers (designed to hybridize to the DNA template adjacent to the polymorphic site) in the presence of allele-specific dye-labeled dideoxyribonucleoside triphosphates and a commercially available modified Taq DNA polymerase. The primer is extended by the dye-terminator specific for the allele present on the template, increasing approximately 10-fold the molecular weight of the fluorophore. At the end of the reaction, the fluorescence polarization of the two dye-terminators in the reaction mixture are analyzed directly without separation or purification. This homogeneous DNA diagnostic method is shown to be highly sensitive and specific and is suitable for automated genotyping of large number of samples. [The data shown in Figure 3 are available as an online supplement at.]

Indexed as

Sequence Homology, Nucleic AcidDNAFluorescence PolarizationGenotypePolymorphism, GeneticSequence Analysis, DNADNA

Identifiers

PMID10330129
PMCPMC310763
OpenAlexW2160437131

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.