Evidence map›Paper›PMID 10329585›Full record

ArticleThe American journal of pathology1999

Mapping of genetic deletions on the long arm of chromosome 4 in human esophageal adenocarcinomas.

C A Rumpel, S M Powell, C A Moskaluk

Open access · bronzeAbstract read
In one paragraph

Article in The American journal of pathology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
3.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 59 citations in OpenAlex.

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  14. Coculturing diverse clonal populations prevents the early-stage neoplastic progression that occurs in the separate clones.Proceedings of the National Academy of Sciences of the United States of America · 2000
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 4 countries.

C A RumpelDepartments of Pathology, Biochemistry and Molecular Genetics, and Medicine, University of Virginia Health Sciences Center, Charlottesville, Virginia, USA.
S M Powell
C A Moskaluk
University of Virginia · USLaboratory of Molecular Genetics · PL

Funding

GENETIC BASIS OF HUMAN CANCERK08CA074431 · NCI · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI MOSKALUK, CHRISTOPHER A. · 1996 to 2000
$87k
NCI NIH HHS 5K08CA74431-02
6 · The paper itself

Abstract

Loss of the long arm of chromosome 4 has been identified previously as a common occurrence in adenocarcinomas of the esophagus and gastroesophageal junction by relatively low resolution genetic surveys. To better define the extent of 4q deletion in these neoplasms we isolated DNA from 29 primary carcinomas using microdissection, and used DNA obtained from xenografts of 14 carcinomas grown in immunodeficient mice in an assay of loss of heterozygosity of 25 polymorphic microsatellite markers distributed along the chromosomal arm. Two carcinomas exhibited widespread microsatellite instability and were excluded from deletion mapping. In the remaining 41 carcinomas, loss of heterozygosity was detected in 33 (80%). Twenty-three cancers showed complete or extensive reduction to homozygosity along the length of the long arm. Ten cancers had smaller discrete areas of loss and were principally useful in discerning three non-overlapping areas of consensus genetic deletion. Area 1 centered on marker D4S1534 at 4q21.1-22, area 2 centered on marker D4S620 at 4q32-33, and area 3 centered on marker D4S426 at 4q35. No known tumor suppressor genes map to these loci, but the frequent deletion of these areas in gastroesophageal carcinomas and in other carcinomas suggests that undiscovered tumor suppressor genes may reside here.

Indexed as

Chromosome DeletionChromosomes, Human, Pair 4AdenocarcinomaAnimalsChromosome MappingEsophageal NeoplasmsGenes, Tumor SuppressorHumansLoss of HeterozygosityMiceMicrosatellite RepeatsStomach NeoplasmsTransplantation, Heterologous

Identifiers

PMID10329585
PMCPMC1866588
OpenAlexW2025470009

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.