Evidence map›Paper›PMID 10318933›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1999

An imprinted, mammalian bicistronic transcript encodes two independent proteins.

T A Gray, S Saitoh, R D Nicholls

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 87 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
87citing papers in PubMed, 2 pooled it
8.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

87 citing papers in PubMed, 2 syntheses or guidelines pooled it, 186 citations in OpenAlex.

  1. Mammalian Polycistronic mRNAs and Disease.Trends in genetics : TIG · 2017
    Pooled it
  2. Recommendations for the investigation of animal models of Prader-Willi syndrome.Mammalian genome : official journal of the International Mammalian Genome Society · 2013
    Guideline
  3. Article
  4. Review
  5. Review
  6. Article
  7. Leaky ribosomal scanning enables tunable translation of bicistronic ORFs in green algae.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Strand asymmetries across genomic processes.Computational and structural biotechnology journal · 2023
    Review
  17. UsingRNA biology · 2023
    Article
  18. Article
  19. Review
  20. Review

27 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

T A GrayDepartment of Genetics, Case Western Reserve University School of Medicine and Center for Human Genetics, University Hospitals of Cleveland, OH 44106, USA.
S Saitoh
R D Nicholls
Hokkaido University · JPCenter for Human Genetics · US

Funding

MOLECULAR STUDIES OF GENOMIC IMPRINTING IN HUMANSR01HD031491 · NICHD · UNIVERSITY OF PENNSYLVANIA · PI NICHOLLS, ROBERT D · 1994 to 2003
$1.3M
FUNCTIONAL ANALYSIS OF IMPRINTING MUTATIONSR01HD036079 · NICHD · UNIVERSITY OF PENNSYLVANIA · PI NICHOLLS, ROBERT D · 1998 to 2002
$739k
MOLECULAR MECHANISMS OF IMPRINTING IN HUMAN DISEASEF32GM018306 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI GRAY, TODD · 1996 to 1997
–
NICHD NIH HHS HD31491NICHD NIH HHS HD36079NICHD NIH HHS R01 HD031491NIGMS NIH HHS F32 GM018306NIGMS NIH HHS GM18306
6 · The paper itself

Abstract

Polycistronic transcripts are common in prokaryotes but rare in eukaryotes. Phylogenetic analysis of the SNRPN (SmN) mRNA in five eutherian mammals reveals a second highly conserved coding sequence, termed SNURF (SNRPN upstream reading frame). The vast majority of nucleotide substitutions in SNURF occur in the wobble codon position, providing strong evolutionary evidence for selection for protein-coding function. Because SNURF-SNRPN maps to human chromosome 15q11-q13 and is paternally expressed, each cistron is a candidate for a role in the imprinted Prader-Willi syndrome (PWS) and PWS mouse models. SNURF encodes a highly basic 71-aa protein that is nuclear-localized (as is SmN). Because SNURF is the only protein-coding sequence within the imprinting regulatory region in 15q11-q13, it may have provided the original selection for imprinting in this domain. Whereas some human tissues express a minor SNURF-only transcript, mouse tissues express only the bicistronic Snurf-Snrpn transcript. We show that both SNURF and SNRPN are translated in normal, but not PWS, human, and mouse tissues and cell lines. These findings identify SNURF as a protein that is produced along with SmN from a bicistronic transcript; polycistronic mRNAs therefore are encoded in mammalian genomes where they may form functional operons.

Indexed as

Nuclear ProteinsRibonucleoproteins, Small NuclearAmino Acid SequenceAnimalsAutoantigensCell LineChromosomes, Human, Pair 15Cloning, MolecularConserved SequenceEvolution, MolecularGenesGenomic ImprintingHumansMiceMolecular Sequence DataOpen Reading FramesAutoantigensNuclear ProteinsProteinsRibonucleoproteins, Small NuclearRNA, MessengersnRNP Core ProteinsSNRPN protein, humanSNURF protein, humanSNURF protein, mouseSNURF protein, ratUbiquitin-Protein Ligases

Identifiers

PMID10318933
PMCPMC21909
OpenAlexW2134548352

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.