Evidence map›Paper›PMID 10224010›Full record

ArticleApplied and environmental microbiology1999

Detection of viable Listeria monocytogenes with a 5' nuclease PCR assay.

D M Norton, C A Batt

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
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  4. Article
  5. Article
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  7. Article
  8. Real-time PCR analysis of Vibrio vulnificus from oysters.Applied and environmental microbiology · 2003
    Article
  9. Article
  10. Article
  11. Article
  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

D M NortonDepartment of Food Science, Cornell University, Ithaca, New York 14853, USA.
C A Batt

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A 5' nuclease assay has been developed to detect viable Listeria monocytogenes. The assay targets the hemolysin A (hlyA) transcript, which is found only in L. monocytogenes. The single-tube, reverse transcriptase (RT), fluorogenic probe-based assay was formatted by using Tth DNA polymerase whose activity was modulated by using the manganese-chelating morpholinepropanesulfonic acid (MOPS) buffer. This assay was quantitative over a 3-log-unit range of template concentrations when tested with an in vitro-transcribed hlyA mRNA. The viability of L. monocytogenes was reduced by heating at various temperatures and times up to a maximum of a 9-D inactivation. The location of the primer had a pronounced effect on the utility of the assay, and primers located in the most distal regions of the hlyA transcript appeared to correlate with the number of CFU while primers located more internal on the amplicon overestimated the cell viability. The assay with primers that included the 3' end of the transcript was an accurate indicator of viability as measured by CFU determination or staining with 5-sulfofluorescein diacetate.

Indexed as

Bacterial ToxinsBacteriological TechniquesBase SequenceDeoxyribonucleasesDNA PrimersEvaluation Studies as TopicFood MicrobiologyHeat-Shock ProteinsHemolysin ProteinsListeria monocytogenesPolymerase Chain ReactionRibonucleasesRNA, BacterialRNA, MessengerBacterial ToxinsDeoxyribonucleasesDNA PrimersHeat-Shock ProteinsHemolysin ProteinshlyA protein, Listeria monocytogenesRibonucleasesRNA, BacterialRNA, Messenger

Identifiers

PMID10224010
PMCPMC91307

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.