Evidence map›Paper›PMID 10220430›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1999

Conservation of sequence and structure flanking the mouse and human beta-globin loci: the beta-globin genes are embedded within an array of odorant receptor genes.

M Bulger, J H van Doorninck, N Saitoh, A Telling, C Farrell, M A Bender, G Felsenfeld, R Axel, M Groudine, J H von Doorninck

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
7.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 141 citations in OpenAlex.

  1. Article
  2. Review
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  4. Review
  5. Article
  6. Article
  7. Olfactory dysfunction and quality of life in patients with transfusion-dependent thalassemia.European archives of oto-rhino-laryngology : official journal of the European Federation of Oto-Rhino-Laryngological Societies (EUFOS) : affiliated with the German Society for Oto-Rhino-Laryngology - Head and Neck Surgery · 2017
    Article
  8. Evolution of hemoglobin and its genes.Cold Spring Harbor perspectives in medicine · 2012
    Article
  9. Article
  10. Article
  11. Globin gene structure in a reptile supports the transpositional model for amniote α- and β-globin gene evolution.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2010
    Article
  12. Article
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  15. Cell type specificity of chromatin organization mediated by CTCF and cohesin.Proceedings of the National Academy of Sciences of the United States of America · 2010
    Article
  16. Review
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  20. Article
4 · The record

Corrections and comments

  • Erratum issued
    von Doorninck JH [corrected to van Doorninck JH]
5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

M BulgerDivision of Basic Sciences, Fred Hutchinson Cancer Research Center, 1100 Fairview Avenue North, Seattle, WA 98109, USA.
J H van Doorninck
N Saitoh
A Telling
C Farrell
M A Bender
G Felsenfeld
R Axel
M Groudine
J H von Doorninck
Howard Hughes Medical Institute · US

Funding

FUNCTION OF HUMAN &MOUSE B GLOBIN LOCUS CONTROL REGIONSR37DK044746 · NIDDK · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GROUDINE, MARK T · 1997 to 2016
$12.3M
FUNCTION OF THE HUMAN B-GLOBIN LOCUS CONTROL REGION-LCRR01DK044746 · NIDDK · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GROUDINE, MARK T · 1992 to 1996
–
NIDDK NIH HHS DK44746NIDDK NIH HHS DK52854NIDDK NIH HHS R37 DK044746
6 · The paper itself

Abstract

In mouse and human, the beta-globin genes reside in a linear array that is associated with a positive regulatory element located 5' to the genes known as the locus control region (LCR). The sequences of the mouse and human beta-globin LCRs are homologous, indicating conservation of an essential function in beta-globin gene regulation. We have sequenced regions flanking the beta-globin locus in both mouse and human and found that homology associated with the LCR is more extensive than previously known, making up a conserved block of approximately 40 kb. In addition, we have identified DNaseI-hypersensitive sites within the newly sequenced regions in both mouse and human, and these structural features also are conserved. Finally, we have found that both mouse and human beta-globin loci are embedded within an array of odorant receptor genes that are expressed in olfactory epithelium, and we also identify an olfactory receptor gene located 3' of the beta-globin locus in chicken. The data demonstrate an evolutionarily conserved genomic organization for the beta-globin locus and suggest a possible role for the beta-globin LCR in control of expression of these odorant receptor genes and/or the presence of mechanisms to separate regulatory signals in different tissues.

Indexed as

Conserved SequenceAnimalsGene Expression RegulationGlobinsHumansMiceMolecular Sequence DataPhylogenyReceptors, OdorantSequence Analysis, DNASequence Homology, Nucleic AcidGlobinsReceptors, Odorant

Identifiers

PMID10220430
PMCPMC21828
OpenAlexW1989811792

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.