Evidence map›Paper›PMID 10198012›Full record

ArticleJournal of bacteriology1999

Isolation of Helicobacter pylori genes that modulate urease activity.

D J McGee, C A May, R M Garner, J M Himpsl, H L Mobley

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
8.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 87 citations in OpenAlex.

  1. Identification and In Silico Characterization of NovelMolecules (Basel, Switzerland) · 2021
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

D J McGeeDepartment of Microbiology and Immunology, University of Maryland School of Medicine, Baltimore, Maryland, USA.
C A May
R M Garner
J M Himpsl
H L Mobley
University of Maryland, Baltimore · US

Funding

UREASE AND GENE EXPRESSION OF HELICOBACTER PYLORIR01AI025567 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MOBLEY, HARRY L. · 1989 to 2008
$2.2M
HELICOBACTER PYLORI NOVEL UREASE ENHANCING GENESF32AI010098 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI MCGEE, DAVID J · 1998 to 2001
$64k
NIAID NIH HHS AI10098-01NIAID NIH HHS AI25567NIAID NIH HHS F32 AI010098NIAID NIH HHS R01 AI025567
6 · The paper itself

Abstract

Helicobacter pylori urease, a nickel-requiring metalloenzyme, hydrolyzes urea to NH3 and CO2. We sought to identify H. pylori genes that modulate urease activity by constructing pHP8080, a plasmid which encodes both H. pylori urease and the NixA nickel transporter. Escherichia coli SE5000 and DH5alpha transformed with pHP8080 resulted in a high-level urease producer and a low-level urease producer, respectively. An H. pylori DNA library was cotransformed into SE5000 (pHP8080) and DH5alpha (pHP8080) and was screened for cotransformants expressing either lowered or heightened urease activity, respectively. Among the clones carrying urease-enhancing factors, 21 of 23 contained hp0548, a gene that potentially encodes a DNA helicase found within the cag pathogenicity island, and hp0511, a gene that potentially encodes a lipoprotein. Each of these genes, when subcloned, conferred a urease-enhancing activity in E. coli (pHP8080) compared with the vector control. Among clones carrying urease-decreasing factors, 11 of 13 clones contained the flbA (also known as flhA) flagellar biosynthesis/regulatory gene (hp1041), an lcrD homolog. The LcrD protein family is involved in type III secretion and flagellar secretion in pathogenic bacteria. Almost no urease activity was detected in E. coli (pHP8080) containing the subcloned flbA gene. Furthermore, there was significantly reduced synthesis of the urease structural subunits in E. coli (pHP8080) containing the flbA gene, as determined by Western blot analysis with UreA and UreB antiserum. Thus, flagellar biosynthesis and urease activity may be linked in H. pylori. These results suggest that H. pylori genes may modulate urease activity.

Indexed as

Cation Transport ProteinsGene Expression Regulation, EnzymologicGenes, BacterialATP-Binding Cassette TransportersBacterial ProteinsCarrier ProteinsCulture MediaDNA HelicasesEscherichia coliGene LibraryHelicobacter pyloriLipoproteinsMembrane ProteinsSequence Analysis, DNATransformation, GeneticUreaseATP-Binding Cassette TransportersBacterial ProteinsCarrier ProteinsCation Transport ProteinsCulture MediaDNA HelicasesflbA protein, Helicobacter pyloriHelB protein, Rhodobacter capsulatusLipoproteinsMembrane ProteinsNixA protein, Helicobacter pyloriUrease

Identifiers

PMID10198012
PMCPMC93674
OpenAlexW1538289774

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.