Evidence map›Paper›PMID 10198004›Full record

ArticleJournal of bacteriology1999

Structural and functional significance of the FGL sequence of the periplasmic chaperone Caf1M of Yersinia pestis.

D A Chapman, A V Zavialov, T V Chernovskaya, A V Karlyshev, G A Zav'yalova, A M Vasiliev, I V Dudich, V M Abramov, V P Zav'yalov, S MacIntyre

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Journal of bacteriology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 32 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

D A ChapmanMicrobiology Division, School of Animal and Microbial Sciences, University of Reading, Reading RG6 6AJ, United Kingdom.
A V Zavialov
T V Chernovskaya
A V Karlyshev
G A Zav'yalova
A M Vasiliev
I V Dudich
V M Abramov
V P Zav'yalov
S MacIntyre
Institute of Immunological Engineering · RUUniversity of Reading · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The periplasmic molecular chaperone Caf1M of Yersinia pestis is a typical representative of a subfamily of specific chaperones involved in assembly of surface adhesins with a very simple structure. One characteristic feature of this Caf1M-like subfamily is possession of an extended, variable sequence (termed FGL) between the F1 and subunit binding G1 beta-strands. In contrast, FGS subfamily members, characterized by PapD, have a short F1-G1 loop and are involved in assembly of complex pili. To elucidate the structural and functional significance of the FGL sequence, a mutant Caf1M molecule (dCaf1M), in which the 27 amino acid residues between the F1 and G1 beta-strands had been deleted, was constructed. Expression of the mutated caf1M in Escherichia coli resulted in accumulation of high levels of dCaf1M. The far-UV circular dichroism spectra of the mutant and wild-type proteins were indistinguishable and exhibited practically the same temperature and pH dependencies. Thus, the FGL sequence of Caf1M clearly does not contribute significantly to the stability of the protein conformation. Preferential cleavage of Caf1M by trypsin at Lys-119 confirmed surface exposure of this part of the FGL sequence in the isolated chaperone and periplasmic chaperone-subunit complex. There was no evidence of surface-localized Caf1 subunit in the presence of the Caf1A outer membrane protein and dCaf1M. In contrast to Caf1M, dCaf1M was not able to form a stable complex with Caf1 nor could it protect the subunit from proteolytic degradation in vivo. This demonstration that the FGL sequence is required for stable chaperone-subunit interaction, but not for folding of a stable chaperone, provides a sound basis for future detailed molecular analyses of the FGL subfamily of chaperones.

Indexed as

Escherichia coli ProteinsPeriplasmic ProteinsYersinia pestisAmino Acid SequenceBacterial ProteinsCircular DichroismGenes, BacterialMembrane ProteinsModels, MolecularMolecular ChaperonesMolecular Sequence DataPeriplasmProtein ConformationProtein FoldingSequence DeletionSpectrometry, FluorescenceBacterial ProteinsCAf1M protein, Yersinia pestisEscherichia coli ProteinsMembrane ProteinsMolecular ChaperonesPapD protein, E coliPeriplasmic ProteinsTranscription FactorsTrypsin

Identifiers

PMID10198004
PMCPMC93666
OpenAlexW2151763805

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.