ArticleGenetics1999
A new Ac-like transposon of Arabidopsis is associated with a deletion of the RPS5 disease resistance gene.
Article in Genetics, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.
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Who cites it
32 citing papers in PubMed, 52 citations in OpenAlex.
- Multiple Buster transposons from hAT superfamily displaying transposition activities in mammal cells.Synthetic and systems biotechnology · 2026Article
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- Plant NLR diversity: the known unknowns of pan-NLRomes.The Plant cell · 2021Review
- High-resolution mapping of Rym14TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021Article
- AthCNV: A Map of DNA Copy Number Variations in the Arabidopsis Genome.The Plant cell · 2020Article
- High Resolution Mapping of aFrontiers in plant science · 2020Article
- ThePlant direct · 2019Article
- Diversity and Evolution of Disease Resistance Genes in Barley (Hordeum vulgare L.).Evolutionary bioinformatics online · 2016Article
- Frequent loss of lineages and deficient duplications accounted for low copy number of disease resistance genes in Cucurbitaceae.BMC genomics · 2013Article
- Variation of presence/absence genes among Arabidopsis populations.BMC evolutionary biology · 2012Article
- Dynamic nucleotide-binding site and leucine-rich repeat-encoding genes in the grass family.Plant physiology · 2012Article
- Survey of sugar beet (Beta vulgaris L.) hAT transposons and MITE-like hATpin derivatives.Plant molecular biology · 2012Article
- Article
- Roles of Trm9- and ALKBH8-like proteins in the formation of modified wobble uridines in Arabidopsis tRNA.Nucleic acids research · 2011Article
- Tissue culture-induced flower-color changes in Saintpaulia caused by excision of the transposon inserted in the flavonoid 3', 5' hydroxylase (F3'5'H) promoter.Plant cell reports · 2011Article
- Heterochromatin, small RNA and post-fertilization dysgenesis in allopolyploid and interploid hybrids of Arabidopsis.The New phytologist · 2010Article
- Imbalanced lignin biosynthesis promotes the sexual reproduction of homothallic oomycete pathogens.PLoS pathogens · 2009Article
- Diversity of LTR-retrotransposons and Enhancer/Suppressor Mutator-like transposons in cassava (Manihot esculenta Crantz).Molecular genetics and genomics : MGG · 2008Article
- Article
- Highly asymmetric rice genomes.BMC genomics · 2007Article
Corrections and comments
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Authors and funding
3 authors at 1 institution in 1 country.
Funding
Abstract
The RPS5 and RFL1 disease resistance genes of Arabidopsis ecotype Col-0 are oriented in tandem and are separated by 1.4 kb. The Ler-0 ecotype contains RFL1, but lacks RPS5. Sequence analysis of the RPS5 deletion region in Ler-0 revealed the presence of an Ac-like transposable element, which we have designated Tag2. Southern hybridization analysis of six Arabidopsis ecotypes revealed 4-11 Tag2-homologous sequences in each, indicating that this element is ubiquitous in Arabidopsis and has been active in recent evolutionary time. The Tag2 insertion adjacent to RFL1 was unique to the Ler-0 ecotype, however, and was not present in two other ecotypes that lack RPS5. DNA sequence from the latter ecotypes lacked a transposon footprint, suggesting that insertion of Tag2 occurred after the initial deletion of RPS5. The deletion breakpoint contained a 192-bp insertion that displayed hallmarks of a nonhomologous DNA end-joining event. We conclude that loss of RPS5 was caused by a double-strand break and subsequent repair, and cannot be attributed to unequal crossing over between resistance gene homologs.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.