Evidence map›Paper›PMID 10082527›Full record

ArticleMolecular and cellular biology1999

Multiple layers of cooperativity regulate enhanceosome-responsive RNA polymerase II transcription complex assembly.

K Ellwood, W Huang, R Johnson, M Carey

Abstract read
In one paragraph

Article in Molecular and cellular biology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
  2. Review
  3. Advances in bioinformatics · 2016
    Article
  4. Article
  5. Review
  6. Article
  7. Progesterone receptor action in leiomyoma and endometrial cancer.Progress in molecular biology and translational science · 2009
    Review
  8. Transient HMGB protein interactions with B-DNA duplexes and complexes.Biochemical and biophysical research communications · 2008
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Direct and distinguishable inhibitory roles for SUMO isoforms in the control of transcriptional synergy.Proceedings of the National Academy of Sciences of the United States of America · 2003
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

K EllwoodDepartment of Biological Chemistry, UCLA School of Medicine, Los Angeles, California 90095-1737, USA.
W Huang
R Johnson
M Carey

Funding

Mechanisms of Synergistic Gene Activation by ZEBRAR01GM057283 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI CAREY, MICHAEL F · 1998 to 2005
$1.4M
NIGMS NIH HHS GM057283NIGMS NIH HHS R01 GM057283
6 · The paper itself

Abstract

Two coordinate forms of transcriptional synergy mediate eukaryotic gene regulation: the greater-than-additive transcriptional response to multiple promoter-bound activators, and the sigmoidal response to increasing activator concentration. The mechanism underlying the sigmoidal response has not been elucidated but is almost certainly founded on the cooperative binding of activators and the general machinery to DNA. Here we explore that mechanism by using highly purified transcription factor preparations and a strong Epstein-Barr virus promoter, BHLF-1, regulated by the virally encoded activator ZEBRA. We demonstrate that two layers of cooperative binding govern transcription complex assembly. First, the architectural proteins HMG-1 and -2 mediate cooperative formation of an enhanceosome containing ZEBRA and cellular Sp1. This enhanceosome then recruits transcription factor IIA (TFIIA) and TFIID to the promoter to form the DA complex. The DA complex, however, stimulates assembly of the enhanceosome itself such that the entire reaction can occur in a highly concerted manner. The data reveal the importance of reciprocal cooperative interactions among activators and the general machinery in eukaryotic gene regulation.

Indexed as

Transcription, GeneticViral ProteinsAllosteric RegulationDNA-Binding ProteinsGene Expression RegulationHerpesvirus 4, HumanHigh Mobility Group ProteinsHoloenzymesModels, GeneticPromoter Regions, GeneticProtein BindingRNA Polymerase IISp1 Transcription FactorTrans-ActivatorsTranscription FactorsTranscription Factors, TFIIBZLF1 protein, Herpesvirus 4, HumanDNA-Binding ProteinsHigh Mobility Group ProteinsHoloenzymesRNA Polymerase IISp1 Transcription FactorTrans-ActivatorsTranscription FactorsTranscription Factors, TFIITranscription Factor TFIIATranscription Factor TFIIDViral Proteins

Identifiers

PMID10082527
PMCPMC84054

What OpenQuestion holds

Texttitle and abstract
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.