Evidence map›Paper›PMID 10051618›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America1999

Type 2 diabetes: evidence for linkage on chromosome 20 in 716 Finnish affected sib pairs.

S Ghosh, R M Watanabe, E R Hauser, T Valle, V L Magnuson, M R Erdos, C D Langefeld, J Balow, D S Ally, K Kohtamaki and 30 more

Abstract readMulticenter Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
26.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 232 citations in OpenAlex.

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  12. Expression-based genome-wide association study links the receptor CD44 in adipose tissue with type 2 diabetes.Proceedings of the National Academy of Sciences of the United States of America · 2012
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

40 authors at 1 institution in 1 country.

S GhoshGenetics and Molecular Biology Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA. sghosh@alw.nih.gov
R M Watanabe
E R Hauser
T Valle
V L Magnuson
M R Erdos
C D Langefeld
J Balow
D S Ally
K Kohtamaki
P Chines
G Birznieks
H S Kaleta
A Musick
C Te
J Tannenbaum
W Eldridge
S Shapiro
C Martin
A Witt
A So
J Chang
B Shurtleff
R Porter
K Kudelko
A Unni
L Segal
R Sharaf
J Blaschak-Harvan
J Eriksson
T Tenkula
G Vidgren
C Ehnholm
E Tuomilehto-Wolf
W Hagopian
T A Buchanan
J Tuomilehto
R N Bergman
F S Collins
M Boehnke
Public Health Institute · US

Funding

University of Michigan Training Program in Genomic ScienceT32HG000040 · NHGRI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Sebastian Zoellner · 1995 to 2026
$16.4M
DESIGN AND ANALYSIS OF HUMAN GENE MAPPING STUDIESR01HG000376 · NHGRI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BOEHNKE, MICHAEL L · 1993 to 2016
$5.5M
POSITIONAL CLONING OF GENES FOR NIDDMF32DK009525 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI WATANABE, RICHARD M · 1996 to 1997
–
NHGRI NIH HHS R01 HG000376NHGRI NIH HHS R01 HG00376NHGRI NIH HHS T32 HG000040NHGRI NIH HHS T32 HG00040NIDDK NIH HHS F32 DK009525NIDDK NIH HHS F32 DK09525
6 · The paper itself

Abstract

We are conducting a genome scan at an average resolution of 10 centimorgans (cM) for type 2 diabetes susceptibility genes in 716 affected sib pairs from 477 Finnish families. To date, our best evidence for linkage is on chromosome 20 with potentially separable peaks located on both the long and short arms. The unweighted multipoint maximum logarithm of odds score (MLS) was 3.08 on 20p (location, chi = 19.5 cM) under an additive model, whereas the weighted MLS was 2.06 on 20q (chi = 57 cM, recurrence risk,lambda(s) = 1. 25, P = 0.009). Weighted logarithm of odds scores of 2.00 (chi = 69.5 cM, P = 0.010) and 1.92 (chi = 18.5 cM, P = 0.013) were also observed. Ordered subset analyses based on sibships with extreme mean values of diabetes-related quantitative traits yielded sets of families who contributed disproportionately to the peaks. Two-hour glucose levels in offspring of diabetic individuals gave a MLS of 2. 12 (P = 0.0018) at 9.5 cM. Evidence from this and other studies suggests at least two diabetes-susceptibility genes on chromosome 20. We have also screened the gene for maturity-onset diabetes of the young 1, hepatic nuclear factor 4-a (HNF-4alpha) in 64 affected sibships with evidence for high chromosomal sharing at its location on chromosome 20q. We found no evidence that sequence changes in this gene accounted for the linkage results we observed.

Indexed as

Chromosomes, Human, Pair 20Genetic VariationModels, GeneticAdultBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsBlood GlucoseChromosome MappingDiabetes Mellitus, Type 2DNA-Binding ProteinsExonsFemaleFinlandGenetic LinkageGenetic MarkersGenetic Predisposition to DiseaseGlucose Tolerance TestBasic Helix-Loop-Helix Leucine Zipper Transcription FactorsBlood GlucoseDNA-Binding ProteinsGenetic MarkersHepatocyte Nuclear Factor 4HNF4A protein, humanMLX protein, humanPhosphoproteinsTranscription Factors

Identifiers

PMID10051618
PMCPMC26760
OpenAlexW2070359751

What OpenQuestion holds

Texttitle and abstract
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.