Evidence map›Paper›PMID 10022856›Full record

ArticleMolecular and cellular biology1999

Human topoisomerase I promotes initiation of simian virus 40 DNA replication in vitro.

P W Trowbridge, R Roy, D T Simmons

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 34 citations in OpenAlex.

  1. The E1 proteins.Virology · 2013
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

P W TrowbridgeDepartment of Biological Sciences, University of Delaware, Newark, Delaware 19716-2590, USA.
R Roy
D T Simmons
University of Delaware · US

Funding

THE STRUCTURE AND FUNCTION OF THE SV40 TUMOR ANTIGENR01CA036118 · NCI · UNIVERSITY OF DELAWARE · PI SIMMONS, DANIEL T. · 1985 to 2009
$2.8M
NCI NIH HHS CA36118NCI NIH HHS R01 CA036118
6 · The paper itself

Abstract

Addition of purified human topoisomerase I (topo I) to simian virus 40 T antigen-driven in vitro DNA replication reactions performed with topo I-deficient extracts results in a greater than 10-fold stimulation of completed molecules as well as a more than 3-fold enhancement of overall DNA replication. To further characterize this stimulation, we first demonstrate that bovine topo I but not Escherichia coli topo I can also enhance DNA replication. By using several human topo I mutants, we show that a catalytically active form of topo I is required. To delineate whether topo I influences the initiation or the elongation step of replication, we performed delayed pulse, pulse-chase, and delayed pulse-chase experiments. The results illustrate that topo I cannot promote the completion of partially replicated molecules but is needed from the beginning of the reaction to initiate replication. Competitive inhibition experiments with the topo I binding T antigen fragment 1-246T and a catalytically inactive topo I mutant suggest that part of topo I's stimulation of replication is mediated through a direct interaction with T antigen. Collectively, our data indicate that topo I enhances the synthesis of fully replicated DNA molecules by forming essential interactions with T antigen and stimulating initiation.

Indexed as

DNA ReplicationVirus ReplicationAnimalsAntigens, Polyomavirus TransformingCatalysisCattleCell LineCell Line, TransformedDNA Topoisomerases, Type IDNA, ViralHumansReplication OriginSimian virus 40SpodopteraAntigens, Polyomavirus TransformingDNA Topoisomerases, Type IDNA, Viral

Identifiers

PMID10022856
PMCPMC83962
OpenAlexW2154774247

What OpenQuestion holds

Texttitle and abstract
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.