Evidence map›Paper›PMID 10022837›Full record

ArticleThe EMBO journal1999

Deletion of a region that is a candidate for the difference between the deletion forms of hereditary persistence of fetal hemoglobin and deltabeta-thalassemia affects beta- but not gamma-globin gene expression.

R Calzolari, T McMorrow, N Yannoutsos, A Langeveld, F Grosveld

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Review
  3. Update in Laboratory Diagnosis of Thalassemia.Frontiers in molecular biosciences · 2020
    Review
  4. Article
  5. A functional element necessary for fetal hemoglobin silencing.The New England journal of medicine · 2011
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Review
  13. Multiplex-PCR assay for the deletions causing hereditary persistence of fetal hemoglobin.Molecular diagnosis : a journal devoted to the understanding of human disease through the clinical application of molecular biology · 2005
    Article
  14. Article
  15. Article
  16. Article
  17. Spatial organization of gene expression: the active chromatin hub.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2003
    Review
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

R CalzolariDepartment of Cell Biology and Genetics, Medical Genetics Centre, Faculty of Medicine, Erasmus University, PO Box 1738, 3000 DR Rotterdam, The Netherlands.
T McMorrow
N Yannoutsos
A Langeveld
F Grosveld
Erasmus MC · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The analysis of a number of cases of beta-globin thalassemia and hereditary persistence of fetal hemoglobin (HPFH) due to large deletions in the beta-globin locus has led to the identification of several DNA elements that have been implicated in the switch from human fetal gamma- to adult beta-globin gene expression. We have tested this hypothesis for an element that covers the minimal distance between the thalassemia and HPFH deletions and is thought to be responsible for the difference between a deletion HPFH and deltabeta-thalassemia, located 5' of the delta-globin gene. This element has been deleted from a yeast artificial chromosome (YAC) containing the complete human beta-globin locus. Analysis of this modified YAC in transgenic mice shows that early embryonic expression is unaffected, but in the fetal liver it is subject to position effects. In addition, the efficiency of transcription of the beta-globin gene is decreased, but the developmental silencing of the gamma-globin genes is unaffected by the deletion. These results show that the deleted element is involved in the activation of the beta-globin gene perhaps through the loss of a structural function required for gene activation by long-range interactions.

Indexed as

Gene DeletionAnimalsChromosomes, Artificial, YeastDeoxyribonuclease IEmbryonic and Fetal DevelopmentFetal HemoglobinGene Expression Regulation, DevelopmentalGlobinsHumansIn Situ Hybridization, FluorescenceLiverMiceMice, TransgenicMicroscopy, FluorescenceRNA, MessengerThalassemiaDeoxyribonuclease IFetal HemoglobinGlobinsRNA, Messenger

Identifiers

PMID10022837
PMCPMC1171187
OpenAlexW2015548262

What OpenQuestion holds

Texttitle and abstract
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.