Evidence map›Paper›PMID 10022127›Full record

ArticleOncogene1999

TIF1gamma, a novel member of the transcriptional intermediary factor 1 family.

L Venturini, J You, M Stadler, R Galien, V Lallemand, M H Koken, M G Mattei, A Ganser, P Chambon, R Losson and 1 more

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Oncogene, 1999. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed, 167 citations in OpenAlex.

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25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

L VenturiniCentre National de la Recherche Scientifique, Unité Propre de Recherche 9051, Laboratoire Associé au Comité de Paris de la Ligue contre le Cancer, Hôpital St. Louis, France.
J You
M Stadler
R Galien
V Lallemand
M H Koken
M G Mattei
A Ganser
P Chambon
R Losson
H de Thé
La Ligue Contre le Cancer · FRInserm · FRMedizinische Hochschule Hannover · DECentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We report the cloning and characterization of a novel member of the Transcriptional Intermediary Factor 1 (TIF1) gene family, human TIF1gamma. Similar to TIF1alpha and TIF1beta, the structure of TIF1beta is characterized by multiple domains: RING finger, B boxes, Coiled coil, PHD/TTC, and bromodomain. Although structurally related to TIF1alpha and TIF1beta, TIF1gamma presents several functional differences. In contrast to TIF1alpha, but like TIF1beta, TIF1 does not interact with nuclear receptors in yeast two-hybrid or GST pull-down assays and does not interfere with retinoic acid response in transfected mammalian cells. Whereas TIF1alpha and TIF1beta were previously found to interact with the KRAB silencing domain of KOX1 and with the HP1alpha, MODI (HP1beta) and MOD2 (HP1gamma) heterochromatinic proteins, suggesting that they may participate in a complex involved in heterochromatin-induced gene repression, TIF1gamma does not interact with either the KRAB domain of KOX1 or the HP1 proteins. Nevertheless, TIF1gamma, like TIF1alpha and TIF1beta, exhibits a strong silencing activity when tethered to a promoter. Since deletion of a novel motif unique to the three TIF1 proteins, called TIF1 signature sequence (TSS), abrogates transcriptional repression by TIF1gamma, this motif likely participates in TIF1 dependent repression.

Indexed as

Multigene FamilyAmino Acid SequenceBase SequenceChromobox Protein Homolog 5Chromosome BandingChromosome MappingCloning, MolecularDNA-Binding ProteinsGene Expression RegulationHumansMolecular Sequence DataNuclear ProteinsProtein BindingRecombinant ProteinsRepressor ProteinsRNA, MessengerCBX1 protein, humanCBX5 protein, humanChromobox Protein Homolog 5DNA-Binding ProteinsNuclear ProteinsRecombinant ProteinsRepressor ProteinsRNA, Messengertranscriptional intermediary factor 1Transcription FactorsTRIM28 protein, humanTripartite Motif-Containing Protein 28

Identifiers

PMID10022127
OpenAlexW1982462516

What OpenQuestion holds

Texttitle and abstract
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.